STRINGSTRING
APF17819.1 APF17819.1 APF17893.1 APF17893.1 APF17905.1 APF17905.1 APF17906.1 APF17906.1 APF17970.1 APF17970.1 APF17971.1 APF17971.1 APF18117.1 APF18117.1 APF18118.1 APF18118.1 APF18119.1 APF18119.1 APF18156.1 APF18156.1 APF18166.1 APF18166.1 APF18167.1 APF18167.1 APF18190.1 APF18190.1 APF18191.1 APF18191.1 APF18195.1 APF18195.1 cheW cheW APF18198.1 APF18198.1 cheR-type cheR-type cheB cheB cheD cheD cheY cheY cheY-2 cheY-2 APF18244.1 APF18244.1 APF18258.1 APF18258.1 APF18267.1 APF18267.1 APF18268.1 APF18268.1 APF18295.1 APF18295.1 APF18324.1 APF18324.1 APF18399.1 APF18399.1 APF18443.1 APF18443.1 APF18495.1 APF18495.1 APF18501.1 APF18501.1 APF18551.1 APF18551.1 APF18631.1 APF18631.1 APF18678.1 APF18678.1 APF18680.1 APF18680.1 APF18722.1 APF18722.1 APF18761.1 APF18761.1 APF18811.1 APF18811.1 APF18917.1 APF18917.1 APF18998.1 APF18998.1 APF19114.1 APF19114.1 APF19228.1 APF19228.1 APF19231.1 APF19231.1 APF19258.1 APF19258.1 APF19347.1 APF19347.1 APF19508.1 APF19508.1 APF19596.1 APF19596.1 APF19603.1 APF19603.1 APF19608.1 APF19608.1 APF19673.1 APF19673.1 APF19730.1 APF19730.1 APF19751.1 APF19751.1 APF19839.1 APF19839.1 ompR ompR APF19871.1 APF19871.1 Cabys_316 Cabys_316 APF19937.1 APF19937.1 APF19938.1 APF19938.1 APF19939.1 APF19939.1 APF19940.1 APF19940.1 APF19979.1 APF19979.1 APF19980.1 APF19980.1 APF19982.1 APF19982.1 APF20039.1 APF20039.1 APF20040.1 APF20040.1 APF20080.1 APF20080.1 APF20109.1 APF20109.1 APF20288.1 APF20288.1 APF20290.1 APF20290.1 APF20350.1 APF20350.1 APF20427.1 APF20427.1 APF20567.1 APF20567.1 APF20572.1 APF20572.1 APF20712.1 APF20712.1 APF20724.1 APF20724.1 APF20902.1 APF20902.1 Cabys_471 Cabys_471 Cabys_497 Cabys_497 Cabys_498 Cabys_498 Cabys_499 Cabys_499 Cabys_543 Cabys_543 Cabys_545 Cabys_545 Cabys_546 Cabys_546 Cabys_547 Cabys_547 Cabys_671 Cabys_671 Cabys_790 Cabys_790 Cabys_847 Cabys_847 Cabys_932 Cabys_932 Cabys_933 Cabys_933 Cabys_934 Cabys_934 Cabys_935 Cabys_935 Cabys_963 Cabys_963 Cabys_977 Cabys_977 Cabys_978 Cabys_978 cheB-2 cheB-2 cheA cheA Cabys_981 Cabys_981 Cabys_982 Cabys_982 cheR cheR cheW-2 cheW-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APF17819.1Response regulator receiver domain-containing protein. (511 aa)
APF17893.1His Kinase A (phospho-acceptor) domain-containing protein. (376 aa)
APF17905.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (209 aa)
APF17906.1PAS domain S-box-containing protein. (777 aa)
APF17970.1Signal transduction histidine kinase, nitrogen specific, NtrB; Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL/two-component system, NtrC family, sensor histidine kinase AtoS. (425 aa)
APF17971.1Response regulator receiver domain-containing protein. (121 aa)
APF18117.1PAS domain S-box-containing protein. (851 aa)
APF18118.1PAS domain S-box-containing protein. (934 aa)
APF18119.1PAS domain S-box-containing protein. (1248 aa)
APF18156.1PAS domain S-box-containing protein. (735 aa)
APF18166.1Two component transcriptional regulator, winged helix family. (228 aa)
APF18167.1Signal transduction histidine kinase. (334 aa)
APF18190.1PAS domain S-box-containing protein. (639 aa)
APF18191.1PAS domain S-box-containing protein. (1017 aa)
APF18195.1Two-component system, chemotaxis family, sensor kinase CheA. (727 aa)
cheWCheW protein. (167 aa)
APF18198.1Methyl-accepting chemotaxis protein. (752 aa)
cheR-typeMCP methyltransferase, CheR-type. (277 aa)
cheBcheB two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (349 aa)
cheDcheD CheD, stimulates methylation of MCP protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (161 aa)
cheYTwo-component system, chemotaxis family, response regulator CheY. (125 aa)
cheY-2Two-component system, chemotaxis family, response regulator CheY. (126 aa)
APF18244.1PAS domain S-box-containing protein. (384 aa)
APF18258.1Putative two component, sigma54 specific, transcriptional regulator; DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (406 aa)
APF18267.1Hypothetical protein. (378 aa)
APF18268.1PAS domain S-box-containing protein. (1264 aa)
APF18295.1PAS domain S-box-containing protein. (1725 aa)
APF18324.1Two-component system, OmpR family, response regulator ChvI. (128 aa)
APF18399.1Response regulator receiver domain-containing protein. (129 aa)
APF18443.1Signal transduction histidine kinase, nitrogen specific. (847 aa)
APF18495.1His Kinase A (phospho-acceptor) domain-containing protein. (546 aa)
APF18501.1PAS domain S-box-containing protein. (1441 aa)
APF18551.1Two-component system, chemotaxis family, response regulator CheY. (138 aa)
APF18631.1Response regulator receiver domain-containing protein. (365 aa)
APF18678.1Diguanylate cyclase (GGDEF) domain-containing protein. (344 aa)
APF18680.1Protein of unknown function (DUF4388). (247 aa)
APF18722.1PAS domain S-box-containing protein. (916 aa)
APF18761.1PAS domain S-box-containing protein. (1450 aa)
APF18811.1Response regulator receiver domain-containing protein. (391 aa)
APF18917.1Signal transduction histidine kinase, nitrogen specific. (692 aa)
APF18998.1Two-component system, cell cycle response regulator/two-component system, unclassified family, sensor histidine kinase and response regulator. (238 aa)
APF19114.1His Kinase A (phospho-acceptor) domain-containing protein. (803 aa)
APF19228.1Response regulator receiver domain-containing protein. (126 aa)
APF19231.1Signal transduction histidine kinase. (812 aa)
APF19258.1His Kinase A (phospho-acceptor) domain-containing protein. (418 aa)
APF19347.1PAS domain S-box-containing protein. (521 aa)
APF19508.1Serine phosphatase RsbU, regulator of sigma subunit. (1132 aa)
APF19596.1PAS domain S-box-containing protein. (978 aa)
APF19603.1His Kinase A (phospho-acceptor) domain-containing protein. (342 aa)
APF19608.1PAS domain S-box-containing protein. (980 aa)
APF19673.1His Kinase A (phospho-acceptor) domain-containing protein. (844 aa)
APF19730.1Response regulator receiver protein; Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP/two-component system, OmpR family, phosphate regulon response regulator OmpR. (123 aa)
APF19751.1PAS domain S-box-containing protein. (1614 aa)
APF19839.1HAMP domain-containing protein. (510 aa)
ompRDNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (241 aa)
APF19871.1PAS domain S-box-containing protein. (728 aa)
Cabys_316Signal transduction histidine kinase. (1291 aa)
APF19937.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (223 aa)
APF19938.1His Kinase A (phospho-acceptor) domain-containing protein. (461 aa)
APF19939.1HAMP domain-containing protein. (491 aa)
APF19940.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (271 aa)
APF19979.1Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. (128 aa)
APF19980.1His Kinase A (phospho-acceptor) domain-containing protein. (450 aa)
APF19982.1PAS domain S-box-containing protein. (926 aa)
APF20039.1Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR. (593 aa)
APF20040.1Two component transcriptional regulator, winged helix family. (230 aa)
APF20080.1PAS domain S-box-containing protein. (1278 aa)
APF20109.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (348 aa)
APF20288.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (836 aa)
APF20290.1His Kinase A (phospho-acceptor) domain-containing protein. (778 aa)
APF20350.1Two-component system, NtrC family, sensor histidine kinase KinB. (104 aa)
APF20427.1Signal transduction histidine kinase. (380 aa)
APF20567.1Response regulator receiver protein. (126 aa)
APF20572.1PAS domain S-box-containing protein. (787 aa)
APF20712.1His Kinase A (phospho-acceptor) domain-containing protein. (834 aa)
APF20724.1Protein of unknown function (DUF4388). (592 aa)
APF20902.1Signal transduction histidine kinase. (363 aa)
Cabys_471Signal transduction histidine kinase. (397 aa)
Cabys_497Signal transduction histidine kinase. (458 aa)
Cabys_498DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (224 aa)
Cabys_499PAS domain S-box-containing protein. (748 aa)
Cabys_543PAS domain S-box-containing protein. (1178 aa)
Cabys_545PAS domain S-box-containing protein. (1042 aa)
Cabys_546PAS domain S-box-containing protein. (520 aa)
Cabys_547Response regulator receiver domain-containing protein. (151 aa)
Cabys_671Signal transduction histidine kinase. (584 aa)
Cabys_790Hypothetical protein. (748 aa)
Cabys_847PAS domain S-box-containing protein. (1302 aa)
Cabys_932Response regulator receiver domain-containing protein. (330 aa)
Cabys_933CheW-like domain-containing protein. (151 aa)
Cabys_934Methyl-accepting chemotaxis protein (MCP) signaling domain-containing protein. (593 aa)
Cabys_935Chemotaxis protein histidine kinase CheA. (1724 aa)
Cabys_963Two-component system, NtrC family, response regulator/two-component system, NtrC family, response regulator PilR. (158 aa)
Cabys_977Response regulator receiver domain-containing protein. (705 aa)
Cabys_978Response regulator receiver domain-containing protein. (255 aa)
cheB-2CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (340 aa)
cheACheA signal transduction histidine kinase. (747 aa)
Cabys_981Methyl-accepting chemotaxis protein. (653 aa)
Cabys_982CheW-like domain-containing protein. (172 aa)
cheRChemotaxis protein methyltransferase CheR. (455 aa)
cheW-2CheW protein. (161 aa)
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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