STRINGSTRING
Cabys_83 Cabys_83 APF18555.1 APF18555.1 APF18684.1 APF18684.1 APF18760.1 APF18760.1 APF18776.1 APF18776.1 APF18870.1 APF18870.1 APF19085.1 APF19085.1 hisC-2 hisC-2 argD argD APF19335.1 APF19335.1 hemL hemL APF19499.1 APF19499.1 argD-2 argD-2 serC serC APF20053.1 APF20053.1 APF20065.1 APF20065.1 argD-3 argD-3 APF20305.1 APF20305.1 Cabys_391 Cabys_391 trpB-2 trpB-2 glyA glyA selD-2 selD-2 Cabys_743 Cabys_743 APF17810.1 APF17810.1 Cabys_115 Cabys_115 APF18088.1 APF18088.1 APF18370.1 APF18370.1 hisC hisC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cabys_83Aspartate/methionine/tyrosine aminotransferase. (1856 aa)
APF18555.1Methionine-gamma-lyase. (399 aa)
APF18684.1Aminotransferase class-III; acetylornithine/N-succinyldiaminopimelate aminotransferase/acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (493 aa)
APF18760.1MOSC domain-containing protein. (154 aa)
APF18776.1Cysteine desulfurase. (383 aa)
APF18870.1Threonine synthase. (425 aa)
APF19085.1aromatic-L-amino-acid decarboxylase. (474 aa)
hisC-2hisC histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (356 aa)
argDargD acetylornithine aminotransferase/acetylornithine/N-succinyldiaminopimelate aminotransferase. (393 aa)
APF19335.1Aspartate/methionine/tyrosine aminotransferase. (782 aa)
hemLhemL glutamate-1-semialdehyde 2,1-aminomutase. (427 aa)
APF19499.18-amino-7-oxononanoate synthase. (396 aa)
argD-2argD acetylornithine aminotransferase apoenzyme. (389 aa)
serCserC phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (361 aa)
APF20053.12-keto-4-methylthiobutyrate aminotransferase apoenzyme. (383 aa)
APF20065.1L-threonine synthase. (433 aa)
argD-3argD ornithine--oxo-acid transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (401 aa)
APF20305.1Maltodextrin phosphorylase. (847 aa)
Cabys_391Cysteine desulfurase. (374 aa)
trpB-2trpB tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (454 aa)
glyAglyA serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (430 aa)
selD-2Selenium donor protein/cysteine desulfurase NifS,TIGR03402; Synthesizes selenophosphate from selenide and ATP. Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (736 aa)
Cabys_743Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (371 aa)
APF17810.1O-acetylhomoserine sulfhydrylase. (433 aa)
Cabys_115Aspartate aminotransferase. (399 aa)
APF18088.1Methionine-gamma-lyase. (394 aa)
APF18370.1Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (232 aa)
hisChisC histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (361 aa)
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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