STRINGSTRING
AHF12952.1 AHF12952.1 AHF12953.1 AHF12953.1 AHF13199.1 AHF13199.1 AHF13200.1 AHF13200.1 AHF13201.1 AHF13201.1 AHF13202.1 AHF13202.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AHF12952.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
AHF12953.1With phospholipase A2; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
AHF13199.1Zinc ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
AHF13200.1Zinc ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
AHF13201.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
AHF13202.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
Your Current Organism:
Barnesiella viscericola
NCBI taxonomy Id: 880074
Other names: B. viscericola DSM 18177, Barnesiella viscericola C46, Barnesiella viscericola DSM 18177, Barnesiella viscericola JCM 13660, Barnesiella viscericola str. DSM 18177, Barnesiella viscericola strain DSM 18177
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