STRINGSTRING
AHF11599.1 AHF11599.1 AHF11691.1 AHF11691.1 AHF11829.1 AHF11829.1 AHF11831.1 AHF11831.1 AHF11839.1 AHF11839.1 AHF13591.1 AHF13591.1 AHF11867.1 AHF11867.1 AHF11869.1 AHF11869.1 AHF11961.1 AHF11961.1 tpx tpx AHF12026.1 AHF12026.1 AHF12098.1 AHF12098.1 AHF12116.1 AHF12116.1 AHF12134.1 AHF12134.1 AHF12148.1 AHF12148.1 AHF12222.1 AHF12222.1 AHF12224.1 AHF12224.1 AHF12281.1 AHF12281.1 AHF12335.1 AHF12335.1 AHF12342.1 AHF12342.1 AHF12380.1 AHF12380.1 AHF12391.1 AHF12391.1 AHF12401.1 AHF12401.1 AHF12422.1 AHF12422.1 AHF12484.1 AHF12484.1 AHF12556.1 AHF12556.1 AHF12583.1 AHF12583.1 AHF12590.1 AHF12590.1 AHF12598.1 AHF12598.1 AHF12599.1 AHF12599.1 AHF13825.1 AHF13825.1 AHF12674.1 AHF12674.1 AHF13838.1 AHF13838.1 secF secF secY secY rpoA rpoA secA secA AHF12844.1 AHF12844.1 AHF13001.1 AHF13001.1 AHF13023.1 AHF13023.1 AHF13047.1 AHF13047.1 AHF13168.1 AHF13168.1 AHF13177.1 AHF13177.1 tuf tuf AHF13191.1 AHF13191.1 rpoB rpoB rpoC rpoC AHF13202.1 AHF13202.1 AHF13459.1 AHF13459.1 AHF13503.1 AHF13503.1 AHF13511.1 AHF13511.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AHF11599.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
AHF11691.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
AHF11829.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
AHF11831.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
AHF11839.1MFS transporter; Member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
AHF13591.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (421 aa)
AHF11867.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)
AHF11869.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
AHF11961.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
tpxLipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (166 aa)
AHF12026.1Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (236 aa)
AHF12098.1Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (192 aa)
AHF12116.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
AHF12134.1Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
AHF12148.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
AHF12222.1Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (131 aa)
AHF12224.1Thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
AHF12281.1Peptidyl-prolyl cis-trans isomerase; FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
AHF12335.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
AHF12342.1Ferritin; Iron-storage protein. (161 aa)
AHF12380.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
AHF12391.1Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)
AHF12401.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
AHF12422.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)
AHF12484.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
AHF12556.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
AHF12583.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
AHF12590.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
AHF12598.1Peptidyl-prolyl cis-trans isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
AHF12599.1Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
AHF13825.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (983 aa)
AHF12674.1Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
AHF13838.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (356 aa)
secFPreprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (999 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (440 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (330 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (1104 aa)
AHF12844.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
AHF13001.1Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
AHF13023.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
AHF13047.1Phosphotyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (159 aa)
AHF13168.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
AHF13177.1Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (365 aa)
tufElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (394 aa)
AHF13191.1Preprotein translocase subunit SecE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SecE/SEC61-gamma family. (65 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1270 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1424 aa)
AHF13202.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
AHF13459.1Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
AHF13503.1RNA polymerase rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (111 aa)
AHF13511.1Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
Your Current Organism:
Barnesiella viscericola
NCBI taxonomy Id: 880074
Other names: B. viscericola DSM 18177, Barnesiella viscericola C46, Barnesiella viscericola DSM 18177, Barnesiella viscericola JCM 13660, Barnesiella viscericola str. DSM 18177, Barnesiella viscericola strain DSM 18177
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.