(8 nodes) Carotene biosynthetic process network (Selaginella moellendorffii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8SNP8_SELML	NnrU domain-containing protein. (291 aa)
	D8T045_SELML	Amino_oxidase domain-containing protein. (560 aa)
	D8T5C7_SELML	Uncharacterized protein. (519 aa)
	D8QRG2_SELML	Uncharacterized protein. (450 aa)
	D8RJD9_SELML	Uncharacterized protein. (450 aa)
	D8RTT4_SELML	Uncharacterized protein. (519 aa)
	D8RV23_SELML	Amino_oxidase domain-containing protein. (556 aa)
	D8SS38_SELML	NnrU domain-containing protein. (371 aa)

Your Current Organism:

Selaginella moellendorffii

NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8QRG2_SELML	D8RJD9_SELML	D8QRG2	D8RJD9	Uncharacterized protein.	Uncharacterized protein.	0.900
D8QRG2_SELML	D8RTT4_SELML	D8QRG2	D8RTT4	Uncharacterized protein.	Uncharacterized protein.	0.910
D8QRG2_SELML	D8RV23_SELML	D8QRG2	D8RV23	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.572
D8QRG2_SELML	D8SNP8_SELML	D8QRG2	D8SNP8	Uncharacterized protein.	NnrU domain-containing protein.	0.562
D8QRG2_SELML	D8SS38_SELML	D8QRG2	D8SS38	Uncharacterized protein.	NnrU domain-containing protein.	0.562
D8QRG2_SELML	D8T045_SELML	D8QRG2	D8T045	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.572
D8QRG2_SELML	D8T5C7_SELML	D8QRG2	D8T5C7	Uncharacterized protein.	Uncharacterized protein.	0.910
D8RJD9_SELML	D8QRG2_SELML	D8RJD9	D8QRG2	Uncharacterized protein.	Uncharacterized protein.	0.900
D8RJD9_SELML	D8RTT4_SELML	D8RJD9	D8RTT4	Uncharacterized protein.	Uncharacterized protein.	0.910
D8RJD9_SELML	D8RV23_SELML	D8RJD9	D8RV23	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.572
D8RJD9_SELML	D8SNP8_SELML	D8RJD9	D8SNP8	Uncharacterized protein.	NnrU domain-containing protein.	0.562
D8RJD9_SELML	D8SS38_SELML	D8RJD9	D8SS38	Uncharacterized protein.	NnrU domain-containing protein.	0.562
D8RJD9_SELML	D8T045_SELML	D8RJD9	D8T045	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.572
D8RJD9_SELML	D8T5C7_SELML	D8RJD9	D8T5C7	Uncharacterized protein.	Uncharacterized protein.	0.910
D8RTT4_SELML	D8QRG2_SELML	D8RTT4	D8QRG2	Uncharacterized protein.	Uncharacterized protein.	0.910
D8RTT4_SELML	D8RJD9_SELML	D8RTT4	D8RJD9	Uncharacterized protein.	Uncharacterized protein.	0.910
D8RTT4_SELML	D8RV23_SELML	D8RTT4	D8RV23	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.564
D8RTT4_SELML	D8SNP8_SELML	D8RTT4	D8SNP8	Uncharacterized protein.	NnrU domain-containing protein.	0.780
D8RTT4_SELML	D8SS38_SELML	D8RTT4	D8SS38	Uncharacterized protein.	NnrU domain-containing protein.	0.780
D8RTT4_SELML	D8T045_SELML	D8RTT4	D8T045	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.564