(22 nodes) CCR4-NOT complex network (Selaginella moellendorffii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8QRL0_SELML	Uncharacterized protein. (238 aa)
	D8RGN4_SELML	Uncharacterized protein. (340 aa)
	D8RGN9_SELML	NOT2_3_5 domain-containing protein. (209 aa)
	D8RW77_SELML	Uncharacterized protein. (305 aa)
	D8S588_SELML	Uncharacterized protein. (349 aa)
	D8S593_SELML	Uncharacterized protein. (824 aa)
	D8SCK0_SELML	Uncharacterized protein. (285 aa)
	D8SCP9_SELML	Uncharacterized protein. (274 aa)
	D8SEL9_SELML	Uncharacterized protein. (1838 aa)
	D8SFP5_SELML	NOT2_3_5 domain-containing protein. (669 aa)
	D8SGS3_SELML	Uncharacterized protein. (287 aa)
	D8SGX0_SELML	Uncharacterized protein. (274 aa)
	D8SMF7_SELML	Uncharacterized protein. (759 aa)
	D8SWS9_SELML	RING-type domain-containing protein. (56 aa)
	D8T316_SELML	F-box domain-containing protein. (460 aa)
	D8T9D9_SELML	NOT2_3_5 domain-containing protein. (626 aa)
	D8TBX2_SELML	Uncharacterized protein. (293 aa)
	D8QXF8_SELML	Uncharacterized protein. (570 aa)
	D8R324_SELML	Uncharacterized protein. (759 aa)
	D8R3P7_SELML	Uncharacterized protein. (274 aa)
	D8R9T6_SELML	Uncharacterized protein. (1838 aa)
	D8RC68_SELML	F-box domain-containing protein. (437 aa)

Your Current Organism:

Selaginella moellendorffii

NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8QRL0_SELML	D8QXF8_SELML	D8QRL0	D8QXF8	Uncharacterized protein.	Uncharacterized protein.	0.953
D8QRL0_SELML	D8R324_SELML	D8QRL0	D8R324	Uncharacterized protein.	Uncharacterized protein.	0.926
D8QRL0_SELML	D8R3P7_SELML	D8QRL0	D8R3P7	Uncharacterized protein.	Uncharacterized protein.	0.943
D8QRL0_SELML	D8R9T6_SELML	D8QRL0	D8R9T6	Uncharacterized protein.	Uncharacterized protein.	0.989
D8QRL0_SELML	D8RC68_SELML	D8QRL0	D8RC68	Uncharacterized protein.	F-box domain-containing protein.	0.882
D8QRL0_SELML	D8RGN4_SELML	D8QRL0	D8RGN4	Uncharacterized protein.	Uncharacterized protein.	0.882
D8QRL0_SELML	D8RGN9_SELML	D8QRL0	D8RGN9	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.988
D8QRL0_SELML	D8RW77_SELML	D8QRL0	D8RW77	Uncharacterized protein.	Uncharacterized protein.	0.991
D8QRL0_SELML	D8S588_SELML	D8QRL0	D8S588	Uncharacterized protein.	Uncharacterized protein.	0.882
D8QRL0_SELML	D8S593_SELML	D8QRL0	D8S593	Uncharacterized protein.	Uncharacterized protein.	0.988
D8QRL0_SELML	D8SCK0_SELML	D8QRL0	D8SCK0	Uncharacterized protein.	Uncharacterized protein.	0.943
D8QRL0_SELML	D8SCP9_SELML	D8QRL0	D8SCP9	Uncharacterized protein.	Uncharacterized protein.	0.924
D8QRL0_SELML	D8SEL9_SELML	D8QRL0	D8SEL9	Uncharacterized protein.	Uncharacterized protein.	0.989
D8QRL0_SELML	D8SFP5_SELML	D8QRL0	D8SFP5	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.988
D8QRL0_SELML	D8SGS3_SELML	D8QRL0	D8SGS3	Uncharacterized protein.	Uncharacterized protein.	0.943
D8QRL0_SELML	D8SGX0_SELML	D8QRL0	D8SGX0	Uncharacterized protein.	Uncharacterized protein.	0.924
D8QRL0_SELML	D8SMF7_SELML	D8QRL0	D8SMF7	Uncharacterized protein.	Uncharacterized protein.	0.926
D8QRL0_SELML	D8T316_SELML	D8QRL0	D8T316	Uncharacterized protein.	F-box domain-containing protein.	0.882
D8QRL0_SELML	D8T9D9_SELML	D8QRL0	D8T9D9	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.988
D8QRL0_SELML	D8TBX2_SELML	D8QRL0	D8TBX2	Uncharacterized protein.	Uncharacterized protein.	0.991