(31 nodes) Regulation of development, heterochronic network (Selaginella moellendorffii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8RMG1_SELML	SBP-type domain-containing protein. (74 aa)
	D8T7U8_SELML	Uncharacterized protein. (336 aa)
	CTR1L1-2	Uncharacterized protein CTR1L1-2. (620 aa)
	FCA-1	Uncharacterized protein FCA-1. (509 aa)
	D8T4Q1_SELML	Uncharacterized protein. (1015 aa)
	D8T3J9_SELML	MID_MedPIWI domain-containing protein. (1714 aa)
	D8TFQ0_SELML	Myb-like domain-containing protein. (932 aa)
	D8TCQ0_SELML	Med12 domain-containing protein. (2096 aa)
	D8TAB8_SELML	MID_MedPIWI domain-containing protein. (1665 aa)
	CTR1L1-1	Uncharacterized protein CTR1L1-1. (675 aa)
	D8T9I5_SELML	Uncharacterized protein. (157 aa)
	D8T9G1_SELML	Uncharacterized protein. (232 aa)
	FCA-2	Uncharacterized protein FCA-2. (480 aa)
	D8SWM1_SELML	Uncharacterized protein. (1182 aa)
	D8SUB4_SELML	Uncharacterized protein. (2131 aa)
	D8SRT7_SELML	DUF5311 domain-containing protein. (1297 aa)
	D8SRE1_SELML	Amino_oxidase domain-containing protein. (548 aa)
	D8SR25_SELML	Myb-like domain-containing protein. (944 aa)
	D8SQX1_SELML	Uncharacterized protein. (227 aa)
	D8SNC0_SELML	Amino_oxidase domain-containing protein. (548 aa)
	D8SLQ6_SELML	Uncharacterized protein. (264 aa)
	D8SJX2_SELML	Homeobox domain-containing protein. (603 aa)
	D8SFU1_SELML	Uncharacterized protein. (162 aa)
	D8SFR6_SELML	Uncharacterized protein. (219 aa)
	D8SF75_SELML	DUF5311 domain-containing protein. (1349 aa)
	D8SEU7_SELML	ATP-dependent Clp protease proteolytic subunit. (213 aa)
	D8RTG7_SELML	Uncharacterized protein. (268 aa)
	D8RP28_SELML	Med12 domain-containing protein. (2096 aa)
	D8RMM1_SELML	Uncharacterized protein. (264 aa)
	D8R401_SELML	Uncharacterized protein. (121 aa)
	D8QUD4_SELML	Uncharacterized protein. (289 aa)

Your Current Organism:

Selaginella moellendorffii

NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTR1L1-1	CTR1L1-2	D8SYB4	D8T748	Uncharacterized protein CTR1L1-1.	Uncharacterized protein CTR1L1-2.	0.900
CTR1L1-2	CTR1L1-1	D8T748	D8SYB4	Uncharacterized protein CTR1L1-2.	Uncharacterized protein CTR1L1-1.	0.900
D8RP28_SELML	D8SF75_SELML	D8RP28	D8SF75	Med12 domain-containing protein.	DUF5311 domain-containing protein.	0.468
D8RP28_SELML	D8SFR6_SELML	D8RP28	D8SFR6	Med12 domain-containing protein.	Uncharacterized protein.	0.590
D8RP28_SELML	D8SFU1_SELML	D8RP28	D8SFU1	Med12 domain-containing protein.	Uncharacterized protein.	0.590
D8RP28_SELML	D8SRT7_SELML	D8RP28	D8SRT7	Med12 domain-containing protein.	DUF5311 domain-containing protein.	0.471
D8RP28_SELML	D8SWM1_SELML	D8RP28	D8SWM1	Med12 domain-containing protein.	Uncharacterized protein.	0.499
D8RP28_SELML	D8T3J9_SELML	D8RP28	D8T3J9	Med12 domain-containing protein.	MID_MedPIWI domain-containing protein.	0.813
D8RP28_SELML	D8T4Q1_SELML	D8RP28	D8T4Q1	Med12 domain-containing protein.	Uncharacterized protein.	0.495
D8RP28_SELML	D8T9G1_SELML	D8RP28	D8T9G1	Med12 domain-containing protein.	Uncharacterized protein.	0.590
D8RP28_SELML	D8T9I5_SELML	D8RP28	D8T9I5	Med12 domain-containing protein.	Uncharacterized protein.	0.590
D8RP28_SELML	D8TAB8_SELML	D8RP28	D8TAB8	Med12 domain-containing protein.	MID_MedPIWI domain-containing protein.	0.813
D8RTG7_SELML	D8SQX1_SELML	D8RTG7	D8SQX1	Uncharacterized protein.	Uncharacterized protein.	0.543
D8RTG7_SELML	D8SR25_SELML	D8RTG7	D8SR25	Uncharacterized protein.	Myb-like domain-containing protein.	0.436
D8RTG7_SELML	D8SUB4_SELML	D8RTG7	D8SUB4	Uncharacterized protein.	Uncharacterized protein.	0.436
D8RTG7_SELML	D8TFQ0_SELML	D8RTG7	D8TFQ0	Uncharacterized protein.	Myb-like domain-containing protein.	0.436
D8SF75_SELML	D8RP28_SELML	D8SF75	D8RP28	DUF5311 domain-containing protein.	Med12 domain-containing protein.	0.468
D8SF75_SELML	D8SWM1_SELML	D8SF75	D8SWM1	DUF5311 domain-containing protein.	Uncharacterized protein.	0.512
D8SF75_SELML	D8T4Q1_SELML	D8SF75	D8T4Q1	DUF5311 domain-containing protein.	Uncharacterized protein.	0.485
D8SF75_SELML	D8TCQ0_SELML	D8SF75	D8TCQ0	DUF5311 domain-containing protein.	Med12 domain-containing protein.	0.468