(8 nodes) DNA endoreduplication network (Selaginella moellendorffii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8R0G5_SELML	Uncharacterized protein. (276 aa)
	UPL3-2	Ubiquitin-protein ligase, UPL3. (1827 aa)
	D8REU9_SELML	Uncharacterized protein. (300 aa)
	TOP6B	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (655 aa)
	D8RIE0_SELML	Uncharacterized protein. (289 aa)
	UPL3-1	Ubiquitin-protein ligase, UPL3. (1827 aa)
	D8T1T0_SELML	Uncharacterized protein. (275 aa)
	TOP6B-2	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (578 aa)

Your Current Organism:

Selaginella moellendorffii

NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8REU9_SELML	TOP6B	D8REU9	D8RF35	Uncharacterized protein.	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	0.536
D8REU9_SELML	TOP6B-2	D8REU9	D8SDA0	Uncharacterized protein.	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	0.525
D8RIE0_SELML	TOP6B	D8RIE0	D8RF35	Uncharacterized protein.	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	0.538
D8RIE0_SELML	TOP6B-2	D8RIE0	D8SDA0	Uncharacterized protein.	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	0.527
TOP6B	D8REU9_SELML	D8RF35	D8REU9	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	Uncharacterized protein.	0.536
TOP6B	D8RIE0_SELML	D8RF35	D8RIE0	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	Uncharacterized protein.	0.538
TOP6B-2	D8REU9_SELML	D8SDA0	D8REU9	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	Uncharacterized protein.	0.525
TOP6B-2	D8RIE0_SELML	D8SDA0	D8RIE0	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family.	Uncharacterized protein.	0.527
UPL3-1	UPL3-2	D8RSC7	D8RDD0	Ubiquitin-protein ligase, UPL3.	Ubiquitin-protein ligase, UPL3.	0.900
UPL3-2	UPL3-1	D8RDD0	D8RSC7	Ubiquitin-protein ligase, UPL3.	Ubiquitin-protein ligase, UPL3.	0.900