(15 nodes) PML body network (Selaginella moellendorffii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8S6B9_SELML	Uncharacterized protein. (123 aa)
	D8SAI1_SELML	Endo/exonuclease/phosphatase domain-containing protein. (265 aa)
	CRY3-2	Uncharacterized protein CRY3-2. (559 aa)
	D8QX07_SELML	Uncharacterized protein. (962 aa)
	CRY2-1	Uncharacterized protein CRY2-1. (539 aa)
	CRY1-1	Uncharacterized protein CRY1-1. (494 aa)
	D8QVG2_SELML	Endo/exonuclease/phosphatase domain-containing protein. (265 aa)
	D8T6Y7_SELML	Uncharacterized protein. (416 aa)
	CRY2-2	Uncharacterized protein CRY2-2. (489 aa)
	D8SY55_SELML	Uncharacterized protein. (392 aa)
	D8SY24_SELML	Uncharacterized protein. (185 aa)
	D8SXV1_SELML	Uncharacterized protein. (975 aa)
	D8ST26_SELML	Uncharacterized protein. (129 aa)
	CRY1-2	Uncharacterized protein CRY1-2. (494 aa)
	CRY3-1	Uncharacterized protein CRY3-1. (559 aa)

Your Current Organism:

Selaginella moellendorffii

NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8QVG2_SELML	D8ST26_SELML	D8QVG2	D8ST26	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.491
D8QVG2_SELML	D8SY24_SELML	D8QVG2	D8SY24	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.491
D8QX07_SELML	D8SXV1_SELML	D8QX07	D8SXV1	Uncharacterized protein.	Uncharacterized protein.	0.900
D8SAI1_SELML	D8ST26_SELML	D8SAI1	D8ST26	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.491
D8SAI1_SELML	D8SY24_SELML	D8SAI1	D8SY24	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.491
D8ST26_SELML	D8QVG2_SELML	D8ST26	D8QVG2	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.491
D8ST26_SELML	D8SAI1_SELML	D8ST26	D8SAI1	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.491
D8SXV1_SELML	D8QX07_SELML	D8SXV1	D8QX07	Uncharacterized protein.	Uncharacterized protein.	0.900
D8SY24_SELML	D8QVG2_SELML	D8SY24	D8QVG2	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.491
D8SY24_SELML	D8SAI1_SELML	D8SY24	D8SAI1	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.491