(4 nodes) Exosome complex RNA-binding protein 1/RRP40/RRP4 network (Selaginella moellendorffii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8R4B3_SELML	KH_dom_type_1 domain-containing protein. (271 aa)
	D8RKE6_SELML	KH_dom_type_1 domain-containing protein. (270 aa)
	D8RU21_SELML	KH_dom_type_1 domain-containing protein. (223 aa)
	D8QYF0_SELML	KH_dom_type_1 domain-containing protein. (231 aa)

Your Current Organism:

Selaginella moellendorffii

NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8QYF0_SELML	D8R4B3_SELML	D8QYF0	D8R4B3	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.994
D8QYF0_SELML	D8RKE6_SELML	D8QYF0	D8RKE6	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.994
D8QYF0_SELML	D8RU21_SELML	D8QYF0	D8RU21	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.900
D8R4B3_SELML	D8QYF0_SELML	D8R4B3	D8QYF0	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.994
D8R4B3_SELML	D8RKE6_SELML	D8R4B3	D8RKE6	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.900
D8R4B3_SELML	D8RU21_SELML	D8R4B3	D8RU21	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.994
D8RKE6_SELML	D8QYF0_SELML	D8RKE6	D8QYF0	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.994
D8RKE6_SELML	D8R4B3_SELML	D8RKE6	D8R4B3	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.900
D8RKE6_SELML	D8RU21_SELML	D8RKE6	D8RU21	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.994
D8RU21_SELML	D8QYF0_SELML	D8RU21	D8QYF0	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.900
D8RU21_SELML	D8R4B3_SELML	D8RU21	D8R4B3	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.994
D8RU21_SELML	D8RKE6_SELML	D8RU21	D8RKE6	KH_dom_type_1 domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.994