(11 nodes) (2019) Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat. network (Selaginella moellendorffii)

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Your Input:
	clpP	ATP-dependent Clp protease proteolytic subunit. (206 aa)
	ycf2	Uncharacterized protein ycf2. (1894 aa)
	ndhB	NADH dehydrogenase subunit 2. (517 aa)
	psbB	Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. (508 aa)
	rpl16	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (150 aa)
	ndhA	NADH-plastoquinone oxidoreductase subunit 1. (329 aa)
	orf1697	Protein TIC 214. (1696 aa)
	chlN	Photochlorophyllide reductase subunit chlN. (472 aa)
	psbD	Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. (353 aa)
	ycf3	Photosystem I assembly protein ycf3. (169 aa)
	ChlL	Uncharacterized protein. (300 aa)

Your Current Organism:

Selaginella moellendorffii

NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ChlL	chlN	D8TE56	C7B2K0	Uncharacterized protein.	Photochlorophyllide reductase subunit chlN.	0.999
ChlL	clpP	D8TE56	C7B2H1	Uncharacterized protein.	ATP-dependent Clp protease proteolytic subunit.	0.711
ChlL	ndhB	D8TE56	C7B2E0	Uncharacterized protein.	NADH dehydrogenase subunit 2.	0.536
ChlL	orf1697	D8TE56	C7B2J9	Uncharacterized protein.	Protein TIC 214.	0.827
ChlL	psbB	D8TE56	C7B2H2	Uncharacterized protein.	Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.	0.757
ChlL	rpl16	D8TE56	C7B2I3	Uncharacterized protein.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.703
ChlL	ycf2	D8TE56	C7B2F6	Uncharacterized protein.	Uncharacterized protein ycf2.	0.824
ChlL	ycf3	D8TE56	C7B2K7	Uncharacterized protein.	Photosystem I assembly protein ycf3.	0.532
chlN	ChlL	C7B2K0	D8TE56	Photochlorophyllide reductase subunit chlN.	Uncharacterized protein.	0.999
chlN	clpP	C7B2K0	C7B2H1	Photochlorophyllide reductase subunit chlN.	ATP-dependent Clp protease proteolytic subunit.	0.592
chlN	ndhA	C7B2K0	C7B2J7	Photochlorophyllide reductase subunit chlN.	NADH-plastoquinone oxidoreductase subunit 1.	0.581
chlN	orf1697	C7B2K0	C7B2J9	Photochlorophyllide reductase subunit chlN.	Protein TIC 214.	0.634
chlN	psbB	C7B2K0	C7B2H2	Photochlorophyllide reductase subunit chlN.	Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.	0.604
chlN	psbD	C7B2K0	C7B2K2	Photochlorophyllide reductase subunit chlN.	Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.	0.434
chlN	rpl16	C7B2K0	C7B2I3	Photochlorophyllide reductase subunit chlN.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.704
chlN	ycf2	C7B2K0	C7B2F6	Photochlorophyllide reductase subunit chlN.	Uncharacterized protein ycf2.	0.822
clpP	ChlL	C7B2H1	D8TE56	ATP-dependent Clp protease proteolytic subunit.	Uncharacterized protein.	0.711
clpP	chlN	C7B2H1	C7B2K0	ATP-dependent Clp protease proteolytic subunit.	Photochlorophyllide reductase subunit chlN.	0.592
clpP	ndhA	C7B2H1	C7B2J7	ATP-dependent Clp protease proteolytic subunit.	NADH-plastoquinone oxidoreductase subunit 1.	0.845
clpP	ndhB	C7B2H1	C7B2E0	ATP-dependent Clp protease proteolytic subunit.	NADH dehydrogenase subunit 2.	0.811