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DVU_0132 DVU_0132 DVU_0133 DVU_0133 DVU_0141 DVU_0141 DVU_0143 DVU_0143 DVU_0298 DVU_0298 DVU_0305 DVU_0305 dsvA dsvA dvsB dvsB dsvD dsvD DVU_0480 DVU_0480 DVU_0506 DVU_0506 aprB aprB aprA aprA DVU_1286 DVU_1286 DVU_1287 DVU_1287 DVU_1288 DVU_1288 DVU_1289 DVU_1289 DVU_1290 DVU_1290 DVU_1291 DVU_1291 DVU_1292 DVU_1292 DVU_1293 DVU_1293 sat sat DVU_1566 DVU_1566 dsvC dsvC DVU_3214 DVU_3214 DVU_3215 DVU_3215 DVU_3216 DVU_3216 DVU_3237 DVU_3237 DVU_3276 DVU_3276
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DVU_0132Membrane protein, putative; Identified by similarity to OMNI:NTL01HSA00048; match to protein family HMM PF01925. (374 aa)
DVU_0133Hypothetical protein; Identified by Glimmer2; putative. (240 aa)
DVU_0141Peptidase, M50 family; Identified by match to protein family HMM PF02163. (224 aa)
DVU_0143Conserved hypothetical protein; Identified by similarity to OMNI:CT0872; match to protein family HMM PF03692. (258 aa)
DVU_0298Hypothetical protein; Identified by Glimmer2; putative. (261 aa)
DVU_0305Ferredoxin II; Identified by similarity to SP:P10624; match to protein family HMM PF00037. (64 aa)
dsvADissimilatory sulfite reductase alpha subunit; Part of the complex that catalyzes the reduction of sulfite to sulfide. The alpha and beta subunits may have arisen by gene duplication. They both bind 2 iron-sulfur clusters, but the alpha subunit seems to be catalytically inactive, due to substitutions along the putative substrate access channel, and because it binds sirohydrochlorin (the dematallated form of siroheme) instead of siroheme. (437 aa)
dvsBDissimilatory sulfite reductase beta subunit; Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria. (381 aa)
dsvDDissimilatory sulfite reductase B; May play an essential role in dissimilatory sulfite reduction. (78 aa)
DVU_0480Hypothetical protein; Identified by Glimmer2; putative. (243 aa)
DVU_0506DHH family protein; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. (333 aa)
aprBAdenylylsulphate reductase, beta subunit; Identified by similarity to GP:7109234; match to protein family HMM PF00037; match to protein family HMM TIGR02060. (167 aa)
aprAAdenylyl-sulphate reductase, alpha subunit; Identified by similarity to GP:7109235; match to protein family HMM TIGR02061. (664 aa)
DVU_1286Reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF03916. (387 aa)
DVU_1287Reductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037. (261 aa)
DVU_1288Cytochrome c family protein; Identified by similarity to OMNI:AF0503. (126 aa)
DVU_1289Reductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037. (536 aa)
DVU_1290Nitrate reductase, gamma subunit, putative; Identified by match to protein family HMM PF02665. (334 aa)
DVU_1291Hypothetical protein; Identified by Glimmer2; putative. (131 aa)
DVU_1292Hypothetical protein; Identified by Glimmer2; putative. (57 aa)
DVU_1293Hypothetical protein; Identified by Glimmer2; putative. (138 aa)
satSulfate adenylyltransferase; Identified by similarity to SP:P56864; match to protein family HMM PF01747; match to protein family HMM TIGR00339. (427 aa)
DVU_1566Phosphoadenosine phosphosulfate reductase, putative; Identified by match to protein family HMM PF01507. (255 aa)
dsvCDissimilatory sulfite reductase, gamma subunit; Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria; Belongs to the DsrC/TusE family. (105 aa)
DVU_3214Phosphoenolpyruvate synthase-related protein; Identified by similarity to SP:P42850; match to protein family HMM PF00391; match to protein family HMM PF01326. (884 aa)
DVU_3215Response regulator; Identified by match to protein family HMM PF00072. (121 aa)
DVU_3216Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518. (565 aa)
DVU_3237Phosphoenolpyruvate synthase-related protein; Identified by similarity to SP:P23538; match to protein family HMM PF00391. (773 aa)
DVU_3276Identified by similarity to SP:P08813; match to protein family HMM PF00037. (62 aa)
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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