9 items (Anas platyrhynchos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Your Input:
	PRPF8	Pre-mRNA processing factor 8. (2241 aa)
	SART3	Spliceosome associated factor 3, U4/U6 recycling protein. (941 aa)
	PRPF4	Pre-mRNA processing factor 4. (536 aa)
	LARP7	La ribonucleoprotein domain family member 7. (595 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
	RBM22	RNA binding motif protein 22. (387 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (138 aa)
	ENSAPLP00000020899	RRM domain-containing protein. (794 aa)
	METTL16	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...] (559 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPLP00000020899	LARP7	ENSAPLP00000020899	ENSAPLP00000012698	RRM domain-containing protein.	La ribonucleoprotein domain family member 7.	0.401
ENSAPLP00000020899	PRPF4	ENSAPLP00000020899	ENSAPLP00000006166	RRM domain-containing protein.	Pre-mRNA processing factor 4.	0.595
ENSAPLP00000020899	SART3	ENSAPLP00000020899	ENSAPLP00000005826	RRM domain-containing protein.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.592
LARP7	ENSAPLP00000020899	ENSAPLP00000012698	ENSAPLP00000020899	La ribonucleoprotein domain family member 7.	RRM domain-containing protein.	0.401
LARP7	SART3	ENSAPLP00000012698	ENSAPLP00000005826	La ribonucleoprotein domain family member 7.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.614
LSM3	LSM4	ENSAPLP00000014331	ENSAPLP00000018959	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM3	PRPF4	ENSAPLP00000014331	ENSAPLP00000006166	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 4.	0.976
LSM3	PRPF8	ENSAPLP00000014331	ENSAPLP00000010131	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 8.	0.980
LSM3	RBM22	ENSAPLP00000014331	ENSAPLP00000016316	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RNA binding motif protein 22.	0.527
LSM3	SART3	ENSAPLP00000014331	ENSAPLP00000005826	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.972
LSM4	LSM3	ENSAPLP00000018959	ENSAPLP00000014331	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM4	PRPF4	ENSAPLP00000018959	ENSAPLP00000006166	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 4.	0.964
LSM4	PRPF8	ENSAPLP00000018959	ENSAPLP00000010131	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 8.	0.944
LSM4	RBM22	ENSAPLP00000018959	ENSAPLP00000016316	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RNA binding motif protein 22.	0.557
LSM4	SART3	ENSAPLP00000018959	ENSAPLP00000005826	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.972
METTL16	PRPF4	ENSAPLP00000022581	ENSAPLP00000006166	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]	Pre-mRNA processing factor 4.	0.417
PRPF4	ENSAPLP00000020899	ENSAPLP00000006166	ENSAPLP00000020899	Pre-mRNA processing factor 4.	RRM domain-containing protein.	0.595
PRPF4	LSM3	ENSAPLP00000006166	ENSAPLP00000014331	Pre-mRNA processing factor 4.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.976
PRPF4	LSM4	ENSAPLP00000006166	ENSAPLP00000018959	Pre-mRNA processing factor 4.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.964
PRPF4	METTL16	ENSAPLP00000006166	ENSAPLP00000022581	Pre-mRNA processing factor 4.	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; RNA N6-methyltransferase that methylates adenosine residues of a subset of RNAs and plays a key role in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts. Able to N6- methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs). In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure. In presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifical [...]	0.417