9 items (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RBM8A	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
	CWC25	CWC25 spliceosome associated protein homolog. (377 aa)
	SNRNP200	Small nuclear ribonucleoprotein U5 subunit 200. (2085 aa)
	PRPF8	Pre-mRNA processing factor 8. (2241 aa)
	EIF4A3	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (447 aa)
	RBM22	RNA binding motif protein 22. (387 aa)
	PRPF19	Pre-mRNA processing factor 19. (191 aa)
	ISY1	Uncharacterized protein. (278 aa)
	ENSAPLP00000029661	Uncharacterized protein. (317 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CWC25	EIF4A3	ENSAPLP00000003207	ENSAPLP00000014603	CWC25 spliceosome associated protein homolog.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.769
CWC25	ENSAPLP00000029661	ENSAPLP00000003207	ENSAPLP00000029661	CWC25 spliceosome associated protein homolog.	Uncharacterized protein.	0.527
CWC25	ISY1	ENSAPLP00000003207	ENSAPLP00000026175	CWC25 spliceosome associated protein homolog.	Uncharacterized protein.	0.947
CWC25	PRPF19	ENSAPLP00000003207	ENSAPLP00000020287	CWC25 spliceosome associated protein homolog.	Pre-mRNA processing factor 19.	0.959
CWC25	PRPF8	ENSAPLP00000003207	ENSAPLP00000010131	CWC25 spliceosome associated protein homolog.	Pre-mRNA processing factor 8.	0.962
CWC25	RBM22	ENSAPLP00000003207	ENSAPLP00000016316	CWC25 spliceosome associated protein homolog.	RNA binding motif protein 22.	0.858
CWC25	RBM8A	ENSAPLP00000003207	ENSAPLP00000001249	CWC25 spliceosome associated protein homolog.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.684
CWC25	SNRNP200	ENSAPLP00000003207	ENSAPLP00000004009	CWC25 spliceosome associated protein homolog.	Small nuclear ribonucleoprotein U5 subunit 200.	0.981
EIF4A3	CWC25	ENSAPLP00000014603	ENSAPLP00000003207	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	CWC25 spliceosome associated protein homolog.	0.769
EIF4A3	ENSAPLP00000029661	ENSAPLP00000014603	ENSAPLP00000029661	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.998
EIF4A3	ISY1	ENSAPLP00000014603	ENSAPLP00000026175	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.674
EIF4A3	PRPF19	ENSAPLP00000014603	ENSAPLP00000020287	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	Pre-mRNA processing factor 19.	0.854
EIF4A3	PRPF8	ENSAPLP00000014603	ENSAPLP00000010131	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	Pre-mRNA processing factor 8.	0.933
EIF4A3	RBM22	ENSAPLP00000014603	ENSAPLP00000016316	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	RNA binding motif protein 22.	0.832
EIF4A3	RBM8A	ENSAPLP00000014603	ENSAPLP00000001249	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.997
EIF4A3	SNRNP200	ENSAPLP00000014603	ENSAPLP00000004009	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein U5 subunit 200.	0.924
ENSAPLP00000029661	CWC25	ENSAPLP00000029661	ENSAPLP00000003207	Uncharacterized protein.	CWC25 spliceosome associated protein homolog.	0.527
ENSAPLP00000029661	EIF4A3	ENSAPLP00000029661	ENSAPLP00000014603	Uncharacterized protein.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.998
ENSAPLP00000029661	ISY1	ENSAPLP00000029661	ENSAPLP00000026175	Uncharacterized protein.	Uncharacterized protein.	0.435
ENSAPLP00000029661	PRPF19	ENSAPLP00000029661	ENSAPLP00000020287	Uncharacterized protein.	Pre-mRNA processing factor 19.	0.527