11 items (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACTN1	Actinin alpha 1. (914 aa)
	ACTL7A	Actin like 7A; Belongs to the actin family. (415 aa)
	NEFL	IF rod domain-containing protein; Belongs to the intermediate filament family. (503 aa)
	SHANK2	SH3 and multiple ankyrin repeat domains 2. (1462 aa)
	HOMER1	Homer scaffold protein 1. (355 aa)
	SHANK3	SH3 and multiple ankyrin repeat domains 3. (1647 aa)
	ACTB	Actin beta. (332 aa)
	MPP6	Membrane palmitoylated protein 6; Belongs to the MAGUK family. (600 aa)
	ENSAPLP00000017035	Uncharacterized protein. (209 aa)
	MPP2	Membrane palmitoylated protein 2. (581 aa)
	ACTB-2	Uncharacterized protein. (376 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTB	ACTN1	ENSAPLP00000009880	ENSAPLP00000020134	Actin beta.	Actinin alpha 1.	0.693
ACTB-2	ACTN1	ENSAPLP00000022136	ENSAPLP00000020134	Uncharacterized protein.	Actinin alpha 1.	0.968
ACTL7A	ACTN1	ENSAPLP00000019053	ENSAPLP00000020134	Actin like 7A; Belongs to the actin family.	Actinin alpha 1.	0.482
ACTN1	ACTB	ENSAPLP00000020134	ENSAPLP00000009880	Actinin alpha 1.	Actin beta.	0.693
ACTN1	ACTB-2	ENSAPLP00000020134	ENSAPLP00000022136	Actinin alpha 1.	Uncharacterized protein.	0.968
ACTN1	ACTL7A	ENSAPLP00000020134	ENSAPLP00000019053	Actinin alpha 1.	Actin like 7A; Belongs to the actin family.	0.482
ACTN1	ENSAPLP00000017035	ENSAPLP00000020134	ENSAPLP00000017035	Actinin alpha 1.	Uncharacterized protein.	0.693
ENSAPLP00000017035	ACTN1	ENSAPLP00000017035	ENSAPLP00000020134	Uncharacterized protein.	Actinin alpha 1.	0.693
HOMER1	SHANK2	ENSAPLP00000007522	ENSAPLP00000005982	Homer scaffold protein 1.	SH3 and multiple ankyrin repeat domains 2.	0.565
HOMER1	SHANK3	ENSAPLP00000007522	ENSAPLP00000008325	Homer scaffold protein 1.	SH3 and multiple ankyrin repeat domains 3.	0.784
MPP2	SHANK3	ENSAPLP00000030047	ENSAPLP00000008325	Membrane palmitoylated protein 2.	SH3 and multiple ankyrin repeat domains 3.	0.470
MPP6	SHANK3	ENSAPLP00000014454	ENSAPLP00000008325	Membrane palmitoylated protein 6; Belongs to the MAGUK family.	SH3 and multiple ankyrin repeat domains 3.	0.470
SHANK2	HOMER1	ENSAPLP00000005982	ENSAPLP00000007522	SH3 and multiple ankyrin repeat domains 2.	Homer scaffold protein 1.	0.565
SHANK2	SHANK3	ENSAPLP00000005982	ENSAPLP00000008325	SH3 and multiple ankyrin repeat domains 2.	SH3 and multiple ankyrin repeat domains 3.	0.455
SHANK3	HOMER1	ENSAPLP00000008325	ENSAPLP00000007522	SH3 and multiple ankyrin repeat domains 3.	Homer scaffold protein 1.	0.784
SHANK3	MPP2	ENSAPLP00000008325	ENSAPLP00000030047	SH3 and multiple ankyrin repeat domains 3.	Membrane palmitoylated protein 2.	0.470
SHANK3	MPP6	ENSAPLP00000008325	ENSAPLP00000014454	SH3 and multiple ankyrin repeat domains 3.	Membrane palmitoylated protein 6; Belongs to the MAGUK family.	0.470
SHANK3	SHANK2	ENSAPLP00000008325	ENSAPLP00000005982	SH3 and multiple ankyrin repeat domains 3.	SH3 and multiple ankyrin repeat domains 2.	0.455