(16 nodes) Regulation of neuroinflammatory response network (Anas platyrhynchos)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CTSC	Cathepsin C; Belongs to the peptidase C1 family. (460 aa)
	CST7	Cystatin F. (156 aa)
	TTBK1	Tau tubulin kinase 1. (1348 aa)
	IL18	Interleukin-18. (197 aa)
	STAP1	Signal transducing adaptor family member 1. (316 aa)
	U3IWG8_ANAPP	Ig-like domain-containing protein. (308 aa)
	CX3CL1	SCY domain-containing protein. (481 aa)
	LRRK2	Leucine rich repeat kinase 2. (2534 aa)
	U3J1S1_ANAPP	Uncharacterized protein. (494 aa)
	SYT11	Synaptotagmin 11. (430 aa)
	U3J6P8_ANAPP	Uncharacterized protein. (240 aa)
	DAGLA	Diacylglycerol lipase alpha. (1031 aa)
	ENSAPLP00000020419	NR LBD domain-containing protein. (101 aa)
	ENSAPLP00000022390	Uncharacterized protein. (366 aa)
	ENSAPLP00000029381	Uncharacterized protein. (288 aa)
	ENSAPLP00000032667	Uncharacterized protein. (268 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CX3CL1	ENSAPLP00000022390	ENSAPLP00000012081	ENSAPLP00000022390	SCY domain-containing protein.	Uncharacterized protein.	0.465
CX3CL1	ENSAPLP00000029381	ENSAPLP00000012081	ENSAPLP00000029381	SCY domain-containing protein.	Uncharacterized protein.	0.576
CX3CL1	ENSAPLP00000032667	ENSAPLP00000012081	ENSAPLP00000032667	SCY domain-containing protein.	Uncharacterized protein.	0.609
ENSAPLP00000022390	CX3CL1	ENSAPLP00000022390	ENSAPLP00000012081	Uncharacterized protein.	SCY domain-containing protein.	0.465
ENSAPLP00000022390	ENSAPLP00000029381	ENSAPLP00000022390	ENSAPLP00000029381	Uncharacterized protein.	Uncharacterized protein.	0.961
ENSAPLP00000022390	U3J6P8_ANAPP	ENSAPLP00000022390	ENSAPLP00000015175	Uncharacterized protein.	Uncharacterized protein.	0.669
ENSAPLP00000029381	CX3CL1	ENSAPLP00000029381	ENSAPLP00000012081	Uncharacterized protein.	SCY domain-containing protein.	0.576
ENSAPLP00000029381	ENSAPLP00000022390	ENSAPLP00000029381	ENSAPLP00000022390	Uncharacterized protein.	Uncharacterized protein.	0.961
ENSAPLP00000029381	ENSAPLP00000032667	ENSAPLP00000029381	ENSAPLP00000032667	Uncharacterized protein.	Uncharacterized protein.	0.695
ENSAPLP00000032667	CX3CL1	ENSAPLP00000032667	ENSAPLP00000012081	Uncharacterized protein.	SCY domain-containing protein.	0.609
ENSAPLP00000032667	ENSAPLP00000029381	ENSAPLP00000032667	ENSAPLP00000029381	Uncharacterized protein.	Uncharacterized protein.	0.695
ENSAPLP00000032667	U3J6P8_ANAPP	ENSAPLP00000032667	ENSAPLP00000015175	Uncharacterized protein.	Uncharacterized protein.	0.770
U3IWG8_ANAPP	U3J6P8_ANAPP	ENSAPLP00000011593	ENSAPLP00000015175	Ig-like domain-containing protein.	Uncharacterized protein.	0.517
U3J6P8_ANAPP	ENSAPLP00000022390	ENSAPLP00000015175	ENSAPLP00000022390	Uncharacterized protein.	Uncharacterized protein.	0.669
U3J6P8_ANAPP	ENSAPLP00000032667	ENSAPLP00000015175	ENSAPLP00000032667	Uncharacterized protein.	Uncharacterized protein.	0.770
U3J6P8_ANAPP	U3IWG8_ANAPP	ENSAPLP00000015175	ENSAPLP00000011593	Uncharacterized protein.	Ig-like domain-containing protein.	0.517