(17 nodes) PAC motif network (Anas platyrhynchos)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARNT	Aryl hydrocarbon receptor nuclear translocator. (798 aa)
	SIM2	SIM bHLH transcription factor 2. (675 aa)
	KCNH5	Potassium voltage-gated channel subfamily H member 5. (425 aa)
	PASD1	Uncharacterized protein. (828 aa)
	EPAS1	Endothelial PAS domain protein 1. (876 aa)
	NPAS2	Neuronal PAS domain protein 2. (827 aa)
	KCNH1	Uncharacterized protein. (957 aa)
	ENSAPLP00000023999	PAS domain-containing protein. (956 aa)
	KCNH8	Potassium voltage-gated channel subfamily H member 8. (1028 aa)
	SIM1	SIM bHLH transcription factor 1. (766 aa)
	ARNT2	Aryl hydrocarbon receptor nuclear translocator 2. (746 aa)
	AHR	Uncharacterized protein. (834 aa)
	ENSAPLP00000032061	Uncharacterized protein. (900 aa)
	HIF1A	Hypoxia inducible factor 1 subunit alpha. (770 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator like. (640 aa)
	CLOCK	Clock circadian regulator. (854 aa)
	KCNH4	Potassium voltage-gated channel subfamily H member 4. (386 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHR	ARNT	ENSAPLP00000027946	ENSAPLP00000026641	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.903
AHR	ARNT2	ENSAPLP00000027946	ENSAPLP00000019388	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.903
AHR	ARNTL	ENSAPLP00000027946	ENSAPLP00000003488	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator like.	0.537
AHR	CLOCK	ENSAPLP00000027946	ENSAPLP00000006884	Uncharacterized protein.	Clock circadian regulator.	0.537
AHR	NPAS2	ENSAPLP00000027946	ENSAPLP00000017523	Uncharacterized protein.	Neuronal PAS domain protein 2.	0.537
AHR	PASD1	ENSAPLP00000027946	ENSAPLP00000014836	Uncharacterized protein.	Uncharacterized protein.	0.537
ARNT	AHR	ENSAPLP00000026641	ENSAPLP00000027946	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.903
ARNT	ARNT2	ENSAPLP00000026641	ENSAPLP00000019388	Aryl hydrocarbon receptor nuclear translocator.	Aryl hydrocarbon receptor nuclear translocator 2.	0.553
ARNT	ENSAPLP00000023999	ENSAPLP00000026641	ENSAPLP00000023999	Aryl hydrocarbon receptor nuclear translocator.	PAS domain-containing protein.	0.808
ARNT	ENSAPLP00000032061	ENSAPLP00000026641	ENSAPLP00000032061	Aryl hydrocarbon receptor nuclear translocator.	Uncharacterized protein.	0.872
ARNT	EPAS1	ENSAPLP00000026641	ENSAPLP00000016796	Aryl hydrocarbon receptor nuclear translocator.	Endothelial PAS domain protein 1.	0.899
ARNT	HIF1A	ENSAPLP00000026641	ENSAPLP00000002224	Aryl hydrocarbon receptor nuclear translocator.	Hypoxia inducible factor 1 subunit alpha.	0.926
ARNT	SIM1	ENSAPLP00000026641	ENSAPLP00000012318	Aryl hydrocarbon receptor nuclear translocator.	SIM bHLH transcription factor 1.	0.697
ARNT	SIM2	ENSAPLP00000026641	ENSAPLP00000013878	Aryl hydrocarbon receptor nuclear translocator.	SIM bHLH transcription factor 2.	0.697
ARNT2	AHR	ENSAPLP00000019388	ENSAPLP00000027946	Aryl hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.903
ARNT2	ARNT	ENSAPLP00000019388	ENSAPLP00000026641	Aryl hydrocarbon receptor nuclear translocator 2.	Aryl hydrocarbon receptor nuclear translocator.	0.553
ARNT2	ENSAPLP00000023999	ENSAPLP00000019388	ENSAPLP00000023999	Aryl hydrocarbon receptor nuclear translocator 2.	PAS domain-containing protein.	0.808
ARNT2	ENSAPLP00000032061	ENSAPLP00000019388	ENSAPLP00000032061	Aryl hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.872
ARNT2	EPAS1	ENSAPLP00000019388	ENSAPLP00000016796	Aryl hydrocarbon receptor nuclear translocator 2.	Endothelial PAS domain protein 1.	0.910
ARNT2	HIF1A	ENSAPLP00000019388	ENSAPLP00000002224	Aryl hydrocarbon receptor nuclear translocator 2.	Hypoxia inducible factor 1 subunit alpha.	0.874