(30 nodes) PAS domain superfamily network (Anas platyrhynchos)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NCOA3	Nuclear receptor coactivator. (1401 aa)
	HIF1A	Hypoxia inducible factor 1 subunit alpha. (770 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator like. (640 aa)
	PDE8A	Phosphodiesterase. (779 aa)
	CLOCK	Clock circadian regulator. (854 aa)
	U3IIF5_ANAPP	Phosphodiesterase. (858 aa)
	ARNTL2	Aryl hydrocarbon receptor nuclear translocator like 2. (608 aa)
	KCNH4	Potassium voltage-gated channel subfamily H member 4. (386 aa)
	KCNH7	Potassium voltage-gated channel subfamily H member 7. (1196 aa)
	PER3	Period circadian regulator 3. (1028 aa)
	SIM1	SIM bHLH transcription factor 1. (766 aa)
	KCNH8	Potassium voltage-gated channel subfamily H member 8. (1028 aa)
	NCOA1	Nuclear receptor coactivator. (1479 aa)
	AHRR	Uncharacterized protein. (946 aa)
	SIM2	SIM bHLH transcription factor 2. (675 aa)
	KCNH6	Potassium voltage-gated channel subfamily H member 6. (1139 aa)
	KCNH5	Potassium voltage-gated channel subfamily H member 5. (425 aa)
	PASD1	Uncharacterized protein. (828 aa)
	EPAS1	Endothelial PAS domain protein 1. (876 aa)
	NPAS2	Neuronal PAS domain protein 2. (827 aa)
	KCNH1	Uncharacterized protein. (957 aa)
	ENSAPLP00000032061	Uncharacterized protein. (900 aa)
	ARNT2	Aryl hydrocarbon receptor nuclear translocator 2. (746 aa)
	NPAS3	Neuronal PAS domain protein 3. (910 aa)
	ENSAPLP00000023999	PAS domain-containing protein. (956 aa)
	PASK	Uncharacterized protein. (1340 aa)
	ARNT	Aryl hydrocarbon receptor nuclear translocator. (798 aa)
	AHR	Uncharacterized protein. (834 aa)
	NCOA2	Nuclear receptor coactivator. (1464 aa)
	PER2	Period circadian regulator 2. (1305 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHR	ARNT	ENSAPLP00000027946	ENSAPLP00000026641	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.903
AHR	ARNT2	ENSAPLP00000027946	ENSAPLP00000019388	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.903
AHR	ARNTL	ENSAPLP00000027946	ENSAPLP00000003488	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator like.	0.537
AHR	ARNTL2	ENSAPLP00000027946	ENSAPLP00000008451	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator like 2.	0.537
AHR	CLOCK	ENSAPLP00000027946	ENSAPLP00000006884	Uncharacterized protein.	Clock circadian regulator.	0.537
AHR	NCOA1	ENSAPLP00000027946	ENSAPLP00000013427	Uncharacterized protein.	Nuclear receptor coactivator.	0.537
AHR	NCOA2	ENSAPLP00000027946	ENSAPLP00000029766	Uncharacterized protein.	Nuclear receptor coactivator.	0.537
AHR	NCOA3	ENSAPLP00000027946	ENSAPLP00000030669	Uncharacterized protein.	Nuclear receptor coactivator.	0.537
AHR	NPAS2	ENSAPLP00000027946	ENSAPLP00000017523	Uncharacterized protein.	Neuronal PAS domain protein 2.	0.537
AHR	PASD1	ENSAPLP00000027946	ENSAPLP00000014836	Uncharacterized protein.	Uncharacterized protein.	0.537
AHRR	ARNT	ENSAPLP00000013485	ENSAPLP00000026641	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator.	0.735
AHRR	ARNT2	ENSAPLP00000013485	ENSAPLP00000019388	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator 2.	0.735
AHRR	ARNTL	ENSAPLP00000013485	ENSAPLP00000003488	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator like.	0.537
AHRR	ARNTL2	ENSAPLP00000013485	ENSAPLP00000008451	Uncharacterized protein.	Aryl hydrocarbon receptor nuclear translocator like 2.	0.537
AHRR	CLOCK	ENSAPLP00000013485	ENSAPLP00000006884	Uncharacterized protein.	Clock circadian regulator.	0.537
AHRR	NCOA1	ENSAPLP00000013485	ENSAPLP00000013427	Uncharacterized protein.	Nuclear receptor coactivator.	0.537
AHRR	NCOA2	ENSAPLP00000013485	ENSAPLP00000029766	Uncharacterized protein.	Nuclear receptor coactivator.	0.537
AHRR	NCOA3	ENSAPLP00000013485	ENSAPLP00000030669	Uncharacterized protein.	Nuclear receptor coactivator.	0.537
AHRR	NPAS2	ENSAPLP00000013485	ENSAPLP00000017523	Uncharacterized protein.	Neuronal PAS domain protein 2.	0.537
AHRR	PASD1	ENSAPLP00000013485	ENSAPLP00000014836	Uncharacterized protein.	Uncharacterized protein.	0.537