12 items (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FNDC3A	Fibronectin type III domain containing 3A. (1175 aa)
	U3IKP8_ANAPP	Uncharacterized protein. (1110 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	GRB2	Growth factor receptor bound protein 2. (203 aa)
	FNDC3B	Fibronectin type III domain containing 3B. (1169 aa)
	MKNK1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (438 aa)
	ENSAPLP00000023897	Uncharacterized protein. (208 aa)
	MKNK2	MAPK interacting serine/threonine kinase 2. (286 aa)
	U3J954_ANAPP	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (660 aa)
	BRAF	B-Raf proto-oncogene, serine/threonine kinase. (755 aa)
	CBL	Cbl proto-oncogene. (814 aa)
	SPRY2	Sprouty RTK signaling antagonist 2. (309 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRAF	GRB2	ENSAPLP00000015124	ENSAPLP00000031733	B-Raf proto-oncogene, serine/threonine kinase.	Growth factor receptor bound protein 2.	0.534
BRAF	SPRY2	ENSAPLP00000015124	ENSAPLP00000011341	B-Raf proto-oncogene, serine/threonine kinase.	Sprouty RTK signaling antagonist 2.	0.926
CBL	ENSAPLP00000023897	ENSAPLP00000013414	ENSAPLP00000023897	Cbl proto-oncogene.	Uncharacterized protein.	0.795
CBL	GRB2	ENSAPLP00000013414	ENSAPLP00000031733	Cbl proto-oncogene.	Growth factor receptor bound protein 2.	0.990
CBL	RPS27A	ENSAPLP00000013414	ENSAPLP00000004982	Cbl proto-oncogene.	Ubiquitin-like domain-containing protein.	0.788
CBL	SPRY2	ENSAPLP00000013414	ENSAPLP00000011341	Cbl proto-oncogene.	Sprouty RTK signaling antagonist 2.	0.977
CBL	U3J954_ANAPP	ENSAPLP00000013414	ENSAPLP00000016032	Cbl proto-oncogene.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.589
ENSAPLP00000023897	CBL	ENSAPLP00000023897	ENSAPLP00000013414	Uncharacterized protein.	Cbl proto-oncogene.	0.795
ENSAPLP00000023897	GRB2	ENSAPLP00000023897	ENSAPLP00000031733	Uncharacterized protein.	Growth factor receptor bound protein 2.	0.639
ENSAPLP00000023897	RPS27A	ENSAPLP00000023897	ENSAPLP00000004982	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.997
ENSAPLP00000023897	U3J954_ANAPP	ENSAPLP00000023897	ENSAPLP00000016032	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.421
GRB2	BRAF	ENSAPLP00000031733	ENSAPLP00000015124	Growth factor receptor bound protein 2.	B-Raf proto-oncogene, serine/threonine kinase.	0.534
GRB2	CBL	ENSAPLP00000031733	ENSAPLP00000013414	Growth factor receptor bound protein 2.	Cbl proto-oncogene.	0.990
GRB2	ENSAPLP00000023897	ENSAPLP00000031733	ENSAPLP00000023897	Growth factor receptor bound protein 2.	Uncharacterized protein.	0.639
GRB2	RPS27A	ENSAPLP00000031733	ENSAPLP00000004982	Growth factor receptor bound protein 2.	Ubiquitin-like domain-containing protein.	0.631
GRB2	SPRY2	ENSAPLP00000031733	ENSAPLP00000011341	Growth factor receptor bound protein 2.	Sprouty RTK signaling antagonist 2.	0.859
GRB2	U3J954_ANAPP	ENSAPLP00000031733	ENSAPLP00000016032	Growth factor receptor bound protein 2.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.952
MKNK1	MKNK2	ENSAPLP00000025363	ENSAPLP00000023439	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	MAPK interacting serine/threonine kinase 2.	0.900
MKNK2	MKNK1	ENSAPLP00000023439	ENSAPLP00000025363	MAPK interacting serine/threonine kinase 2.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.900
RPS27A	CBL	ENSAPLP00000004982	ENSAPLP00000013414	Ubiquitin-like domain-containing protein.	Cbl proto-oncogene.	0.788