STRINGSTRING
BRCA1 BRCA1 RMI2 RMI2 CDK3 CDK3 POLH POLH RMI1 RMI1 U3I2H1_ANAPP U3I2H1_ANAPP U3I2I6_ANAPP U3I2I6_ANAPP RPA2 RPA2 RAD51AP1 RAD51AP1 RFC5 RFC5 HERC2 HERC2 RAD51 RAD51 BABAM2 BABAM2 XRCC2 XRCC2 POLK POLK CCNA2 CCNA2 POLD3 POLD3 RPS27A RPS27A RAD17 RAD17 TOP3A TOP3A NBN NBN HUS1 HUS1 RAD1 RAD1 BLM BLM RFC4 RFC4 POLE2 POLE2 BRCA2 BRCA2 CDCA7 CDCA7 MEIOB MEIOB GEN1 GEN1 BRIP1 BRIP1 RFC2 RFC2 H2BE1 H2BE1 CCNA1 CCNA1 TOPBP1 TOPBP1 POLE POLE RFC3 RFC3 RFC1 RFC1 PIAS4 PIAS4 ABRAXAS1 ABRAXAS1 ATM ATM TDRD3 TDRD3 RAD51C RAD51C RNF8 RNF8 U3J5I9_ANAPP U3J5I9_ANAPP CHEK1 CHEK1 EXO1 EXO1 RNF168 RNF168 SIRT7 SIRT7 TIPIN TIPIN BARD1 BARD1 DNA2 DNA2 UBE2I UBE2I ENSAPLP00000017036 ENSAPLP00000017036 ATR ATR RAD51B RAD51B ENSAPLP00000018477 ENSAPLP00000018477 ERCC1 ERCC1 KAT7 KAT7 KXD1 KXD1 RCBTB2 RCBTB2 ENSAPLP00000020417 ENSAPLP00000020417 UBE2V2 UBE2V2 ENSAPLP00000020801 ENSAPLP00000020801 POLD2 POLD2 RAD9A RAD9A MRE11 MRE11 EME1 EME1 ENSAPLP00000022406 ENSAPLP00000022406 RECQL4 RECQL4 ENSAPLP00000022612 ENSAPLP00000022612 ABL1 ABL1 RBBP8 RBBP8 SPIDR SPIDR PALB2 PALB2 NSD2 NSD2 ENSAPLP00000023897 ENSAPLP00000023897 RCBTB1 RCBTB1 PPP4R2 PPP4R2 UIMC1 UIMC1 RNF169 RNF169 POLE4 POLE4 XRCC3 XRCC3 ENSAPLP00000026881 ENSAPLP00000026881 ENSAPLP00000026997 ENSAPLP00000026997 TIMELESS TIMELESS PCNA PCNA ENSAPLP00000028245 ENSAPLP00000028245 ATRIP ATRIP ENSAPLP00000028423 ENSAPLP00000028423 TP53BP1 TP53BP1 SIRT6 SIRT6 ENSAPLP00000029564 ENSAPLP00000029564 ENSAPLP00000029576 ENSAPLP00000029576 SLX4 SLX4 BRCC3 BRCC3 SLF1 SLF1 RAD52 RAD52 RPA1 RPA1 RPA3 RPA3 ENSAPLP00000031212 ENSAPLP00000031212 SLX1 SLX1 ENSAPLP00000031941 ENSAPLP00000031941 POLE3 POLE3 EXD2 EXD2 PWWP2A PWWP2A ENSAPLP00000032945 ENSAPLP00000032945
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BRCA1BRCA1 DNA repair associated. (1846 aa)
RMI2RecQ mediated genome instability 2. (139 aa)
CDK3Cyclin dependent kinase 3; Belongs to the protein kinase superfamily. (305 aa)
POLHDNA polymerase eta. (679 aa)
RMI1RecQ mediated genome instability 1. (619 aa)
U3I2H1_ANAPPUncharacterized protein. (1351 aa)
U3I2I6_ANAPPProtein kinase domain-containing protein. (184 aa)
RPA2Replication protein A2. (269 aa)
RAD51AP1RAD51 associated protein 1. (400 aa)
RFC5Replication factor C subunit 5. (211 aa)
HERC2HECT and RLD domain containing E3 ubiquitin protein ligase 2. (4828 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
BABAM2BRISC and BRCA1 A complex member 2. (397 aa)
XRCC2X-ray repair cross complementing 2. (369 aa)
POLKDNA polymerase kappa. (866 aa)
CCNA2Cyclin A2; Belongs to the cyclin family. (390 aa)
POLD3Uncharacterized protein. (464 aa)
RPS27AUbiquitin-like domain-containing protein. (156 aa)
RAD17RAD17 checkpoint clamp loader component. (689 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1020 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (748 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (277 aa)
RAD1RAD1 checkpoint DNA exonuclease. (281 aa)
BLMBLM RecQ like helicase. (1302 aa)
RFC4Replication factor C subunit 4. (362 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
BRCA2BRCA2 DNA repair associated. (3385 aa)
CDCA7Cell division cycle associated 7. (239 aa)
MEIOBMeiosis specific with OB-fold. (476 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (949 aa)
BRIP1Helicase ATP-binding domain-containing protein. (1189 aa)
RFC2Replication factor C subunit 2. (352 aa)
H2BE1Histone H2B; Belongs to the histone H2B family. (162 aa)
CCNA1Cyclin A1; Belongs to the cyclin family. (339 aa)
TOPBP1DNA topoisomerase II binding protein 1. (1469 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2285 aa)
RFC3Replication factor C subunit 3. (356 aa)
RFC1Replication factor C subunit 1. (1145 aa)
PIAS4Protein inhibitor of activated STAT 4. (485 aa)
ABRAXAS1Abraxas 1, BRCA1 A complex subunit. (405 aa)
ATMNon-specific serine/threonine protein kinase. (2967 aa)
TDRD3Tudor domain containing 3. (741 aa)
RAD51CRAD51 paralog C. (330 aa)
RNF8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (612 aa)
U3J5I9_ANAPPUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (156 aa)
CHEK1Checkpoint kinase 1. (435 aa)
EXO1Exonuclease 1. (808 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (609 aa)
SIRT7Sirtuin 7. (408 aa)
TIPINTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (284 aa)
BARD1BRCA1 associated RING domain 1. (789 aa)
DNA2DNA replication helicase/nuclease 2. (1030 aa)
UBE2IUbiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
ENSAPLP00000017036Uncharacterized protein. (36 aa)
ATRUncharacterized protein. (125 aa)
RAD51BRAD51 paralog B. (595 aa)
ENSAPLP00000018477Metallophos domain-containing protein. (73 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (211 aa)
KAT7Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (611 aa)
KXD1KxDL motif containing 1. (353 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (551 aa)
ENSAPLP00000020417Uncharacterized protein. (288 aa)
UBE2V2Ubiquitin conjugating enzyme E2 V2. (144 aa)
ENSAPLP00000020801Uncharacterized protein. (135 aa)
POLD2DNA polymerase delta 2, accessory subunit. (554 aa)
RAD9ARAD9 checkpoint clamp component A. (349 aa)
MRE11MRE11 homolog, double strand break repair nuclease. (230 aa)
EME1Essential meiotic structure-specific endonuclease 1. (390 aa)
ENSAPLP00000022406Helicase ATP-binding domain-containing protein. (72 aa)
RECQL4RecQ like helicase 4. (693 aa)
ENSAPLP00000022612Uncharacterized protein. (133 aa)
ABL1ABL proto-oncogene 1, non-receptor tyrosine kinase. (610 aa)
RBBP8RB binding protein 8, endonuclease. (913 aa)
SPIDRDUF4503 domain-containing protein. (95 aa)
PALB2Partner and localizer of BRCA2. (1362 aa)
NSD2Nuclear receptor binding SET domain protein 2. (1394 aa)
ENSAPLP00000023897Uncharacterized protein. (208 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (713 aa)
PPP4R2Protein phosphatase 4 regulatory subunit 2. (528 aa)
UIMC1Ubiquitin interaction motif containing 1. (812 aa)
RNF169Ring finger protein 169. (458 aa)
POLE4DNA polymerase epsilon 4, accessory subunit. (123 aa)
XRCC3X-ray repair cross complementing 3. (426 aa)
ENSAPLP00000026881Zinc-hook domain-containing protein. (1312 aa)
ENSAPLP00000026997Uncharacterized protein; Belongs to the histone H2B family. (145 aa)
TIMELESSTimeless circadian regulator. (1151 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
ENSAPLP00000028245Uncharacterized protein. (71 aa)
ATRIPATR interacting protein. (1045 aa)
ENSAPLP00000028423Uncharacterized protein; Belongs to the histone H2B family. (122 aa)
TP53BP1Tumor protein p53 binding protein 1. (1970 aa)
SIRT6Sirtuin 6. (203 aa)
ENSAPLP00000029564Uncharacterized protein. (378 aa)
ENSAPLP00000029576Histone H2B; Belongs to the histone H2B family. (126 aa)
SLX4SLX4 structure-specific endonuclease subunit. (1881 aa)
BRCC3BRCA1/BRCA2-containing complex subunit 3. (306 aa)
SLF1SMC5-SMC6 complex localization factor 1. (940 aa)
RAD52RAD52 homolog, DNA repair protein. (420 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (685 aa)
RPA3Replication protein A3. (132 aa)
ENSAPLP00000031212SH2 domain-containing protein. (71 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (228 aa)
ENSAPLP00000031941Histone H2B; Belongs to the histone H2B family. (126 aa)
POLE3CBFD_NFYB_HMF domain-containing protein. (143 aa)
EXD2Exonuclease 3'-5' domain containing 2. (767 aa)
PWWP2APWWP domain-containing protein. (208 aa)
ENSAPLP00000032945Uncharacterized protein. (69 aa)
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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