20 items (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RFC5	Replication factor C subunit 5. (211 aa)
	RPA2	Replication protein A2. (269 aa)
	POLK	DNA polymerase kappa. (866 aa)
	POLD3	Uncharacterized protein. (464 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	U3IG37_ANAPP	ATPase_AAA_core domain-containing protein. (1104 aa)
	RFC4	Replication factor C subunit 4. (362 aa)
	MEIOB	Meiosis specific with OB-fold. (476 aa)
	RFC2	Replication factor C subunit 2. (352 aa)
	RFC3	Replication factor C subunit 3. (356 aa)
	RFC1	Replication factor C subunit 1. (1145 aa)
	KXD1	KxDL motif containing 1. (353 aa)
	RCBTB2	RCC1 and BTB domain containing protein 2. (551 aa)
	POLD2	DNA polymerase delta 2, accessory subunit. (554 aa)
	ATAD5	Uncharacterized protein. (587 aa)
	ENSAPLP00000023897	Uncharacterized protein. (208 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (713 aa)
	PCNA	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (262 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (685 aa)
	RPA3	Replication protein A3. (132 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATAD5	ENSAPLP00000023897	ENSAPLP00000023421	ENSAPLP00000023897	Uncharacterized protein.	Uncharacterized protein.	0.411
ATAD5	MEIOB	ENSAPLP00000023421	ENSAPLP00000007994	Uncharacterized protein.	Meiosis specific with OB-fold.	0.675
ATAD5	PCNA	ENSAPLP00000023421	ENSAPLP00000028238	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.914
ATAD5	POLD2	ENSAPLP00000023421	ENSAPLP00000021348	Uncharacterized protein.	DNA polymerase delta 2, accessory subunit.	0.616
ATAD5	POLD3	ENSAPLP00000023421	ENSAPLP00000004807	Uncharacterized protein.	Uncharacterized protein.	0.468
ATAD5	POLK	ENSAPLP00000023421	ENSAPLP00000004615	Uncharacterized protein.	DNA polymerase kappa.	0.583
ATAD5	RFC1	ENSAPLP00000023421	ENSAPLP00000010416	Uncharacterized protein.	Replication factor C subunit 1.	0.481
ATAD5	RFC2	ENSAPLP00000023421	ENSAPLP00000009148	Uncharacterized protein.	Replication factor C subunit 2.	0.924
ATAD5	RFC3	ENSAPLP00000023421	ENSAPLP00000010116	Uncharacterized protein.	Replication factor C subunit 3.	0.952
ATAD5	RFC4	ENSAPLP00000023421	ENSAPLP00000007062	Uncharacterized protein.	Replication factor C subunit 4.	0.949
ATAD5	RFC5	ENSAPLP00000023421	ENSAPLP00000002710	Uncharacterized protein.	Replication factor C subunit 5.	0.942
ATAD5	RPA1	ENSAPLP00000023421	ENSAPLP00000030765	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.675
ATAD5	RPA2	ENSAPLP00000023421	ENSAPLP00000002078	Uncharacterized protein.	Replication protein A2.	0.525
ATAD5	RPA3	ENSAPLP00000023421	ENSAPLP00000030887	Uncharacterized protein.	Replication protein A3.	0.534
ATAD5	RPS27A	ENSAPLP00000023421	ENSAPLP00000004982	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.532
ATAD5	U3IG37_ANAPP	ENSAPLP00000023421	ENSAPLP00000006209	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.931
ENSAPLP00000023897	ATAD5	ENSAPLP00000023897	ENSAPLP00000023421	Uncharacterized protein.	Uncharacterized protein.	0.411
ENSAPLP00000023897	KXD1	ENSAPLP00000023897	ENSAPLP00000018673	Uncharacterized protein.	KxDL motif containing 1.	0.880
ENSAPLP00000023897	PCNA	ENSAPLP00000023897	ENSAPLP00000028238	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.919
ENSAPLP00000023897	POLK	ENSAPLP00000023897	ENSAPLP00000004615	Uncharacterized protein.	DNA polymerase kappa.	0.676