36 items (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPA2	Replication protein A2. (269 aa)
	FANCM	FA complementation group M. (2204 aa)
	FAAP20	Uncharacterized protein. (317 aa)
	ENSAPLP00000025600	Uncharacterized protein. (654 aa)
	ENSAPLP00000025361	Fanconi_A_N domain-containing protein. (1158 aa)
	ENSAPLP00000023897	Uncharacterized protein. (208 aa)
	ENSAPLP00000023021	Uncharacterized protein. (95 aa)
	EME1	Essential meiotic structure-specific endonuclease 1. (390 aa)
	FANCD2	Uncharacterized protein. (305 aa)
	KXD1	KxDL motif containing 1. (353 aa)
	ERCC1	ERCC excision repair 1, endonuclease non-catalytic subunit. (211 aa)
	FANCF	Uncharacterized protein. (338 aa)
	ENSAPLP00000017886	Fanconi_A_N domain-containing protein. (255 aa)
	ATR	Uncharacterized protein. (125 aa)
	FANCC	Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1. (556 aa)
	ENSAPLP00000017617	Uncharacterized protein. (493 aa)
	FANCL	FA complementation group L. (373 aa)
	UBE2T	Ubiquitin conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (373 aa)
	DCLRE1A	DNA cross-link repair 1A. (1001 aa)
	FANCB	FA complementation group B. (853 aa)
	WDR48	WD repeat domain 48. (678 aa)
	NUTF2	Nuclear transport factor 2. (116 aa)
	MEIOB	Meiosis specific with OB-fold. (476 aa)
	FAN1	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1044 aa)
	FAAP24	FA core complex associated protein 24. (215 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	FANCI	FA complementation group I. (935 aa)
	PROSER1	Proline and serine rich 1. (939 aa)
	ATRIP	ATR interacting protein. (1045 aa)
	USP1	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family. (303 aa)
	SLX1	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (228 aa)
	ENSAPLP00000032945	Uncharacterized protein. (69 aa)
	ENSAPLP00000031185	Uncharacterized protein. (140 aa)
	RPA3	Replication protein A3. (132 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (685 aa)
	SLX4	SLX4 structure-specific endonuclease subunit. (1881 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATR	ATRIP	ENSAPLP00000017844	ENSAPLP00000028280	Uncharacterized protein.	ATR interacting protein.	0.997
ATR	ENSAPLP00000017886	ENSAPLP00000017844	ENSAPLP00000017886	Uncharacterized protein.	Fanconi_A_N domain-containing protein.	0.445
ATR	ENSAPLP00000023897	ENSAPLP00000017844	ENSAPLP00000023897	Uncharacterized protein.	Uncharacterized protein.	0.408
ATR	ENSAPLP00000025361	ENSAPLP00000017844	ENSAPLP00000025361	Uncharacterized protein.	Fanconi_A_N domain-containing protein.	0.445
ATR	ERCC1	ENSAPLP00000017844	ENSAPLP00000018553	Uncharacterized protein.	ERCC excision repair 1, endonuclease non-catalytic subunit.	0.578
ATR	FAAP24	ENSAPLP00000017844	ENSAPLP00000006591	Uncharacterized protein.	FA core complex associated protein 24.	0.643
ATR	FANCC	ENSAPLP00000017844	ENSAPLP00000017763	Uncharacterized protein.	Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1.	0.406
ATR	FANCD2	ENSAPLP00000017844	ENSAPLP00000022164	Uncharacterized protein.	Uncharacterized protein.	0.731
ATR	FANCF	ENSAPLP00000017844	ENSAPLP00000017959	Uncharacterized protein.	Uncharacterized protein.	0.499
ATR	FANCI	ENSAPLP00000017844	ENSAPLP00000004594	Uncharacterized protein.	FA complementation group I.	0.589
ATR	FANCL	ENSAPLP00000017844	ENSAPLP00000016248	Uncharacterized protein.	FA complementation group L.	0.499
ATR	FANCM	ENSAPLP00000017844	ENSAPLP00000027475	Uncharacterized protein.	FA complementation group M.	0.988
ATR	MEIOB	ENSAPLP00000017844	ENSAPLP00000007994	Uncharacterized protein.	Meiosis specific with OB-fold.	0.818
ATR	NUTF2	ENSAPLP00000017844	ENSAPLP00000008892	Uncharacterized protein.	Nuclear transport factor 2.	0.420
ATR	RPA1	ENSAPLP00000017844	ENSAPLP00000030765	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.921
ATR	RPA2	ENSAPLP00000017844	ENSAPLP00000002078	Uncharacterized protein.	Replication protein A2.	0.795
ATR	RPA3	ENSAPLP00000017844	ENSAPLP00000030887	Uncharacterized protein.	Replication protein A3.	0.519
ATR	RPS27A	ENSAPLP00000017844	ENSAPLP00000004982	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.409
ATR	UBE2T	ENSAPLP00000017844	ENSAPLP00000016169	Uncharacterized protein.	Ubiquitin conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.	0.476
ATRIP	ATR	ENSAPLP00000028280	ENSAPLP00000017844	ATR interacting protein.	Uncharacterized protein.	0.997