26 items (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MARCHF4	Membrane associated ring-CH-type finger 4. (385 aa)
	TRIM13	Tripartite motif containing 13. (408 aa)
	TRIM59	Uncharacterized protein. (247 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	MARCHF11	Membrane associated ring-CH-type finger 11. (329 aa)
	UGGT1	Uncharacterized protein. (1446 aa)
	EDEM2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (463 aa)
	MARCHF2	RING-CH-type domain-containing protein. (651 aa)
	RNF139	Ring finger protein 139. (666 aa)
	MARCH6	Membrane associated ring-CH-type finger 6. (596 aa)
	MARCHF3	Membrane associated ring-CH-type finger 3. (185 aa)
	UGGT2	UDP-glucose glycoprotein glucosyltransferase 2. (1530 aa)
	MAN1B1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (646 aa)
	RNF103	Ring finger protein 103. (687 aa)
	KXD1	KxDL motif containing 1. (353 aa)
	ENSAPLP00000019610	Uncharacterized protein. (56 aa)
	MARCHF8	Membrane associated ring-CH-type finger 8. (568 aa)
	ENSAPLP00000020525	Uncharacterized protein. (47 aa)
	EDEM3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (862 aa)
	TRIM55	Tripartite motif containing 55. (546 aa)
	ENSAPLP00000023897	Uncharacterized protein. (208 aa)
	MARCHF7	Membrane associated ring-CH-type finger 7. (758 aa)
	ENSAPLP00000028404	RING-CH-type domain-containing protein. (77 aa)
	EDEM1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (367 aa)
	MARCHF1	Membrane associated ring-CH-type finger 1. (542 aa)
	TRIM54	Tripartite motif containing 54. (186 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDEM1	EDEM2	ENSAPLP00000028538	ENSAPLP00000009443	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.906
EDEM2	EDEM1	ENSAPLP00000009443	ENSAPLP00000028538	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.906
EDEM2	UGGT2	ENSAPLP00000009443	ENSAPLP00000016562	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose glycoprotein glucosyltransferase 2.	0.638
ENSAPLP00000023897	KXD1	ENSAPLP00000023897	ENSAPLP00000018673	Uncharacterized protein.	KxDL motif containing 1.	0.880
ENSAPLP00000023897	RNF139	ENSAPLP00000023897	ENSAPLP00000011206	Uncharacterized protein.	Ring finger protein 139.	0.456
ENSAPLP00000023897	RPS27A	ENSAPLP00000023897	ENSAPLP00000004982	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.997
ENSAPLP00000028404	MARCH6	ENSAPLP00000028404	ENSAPLP00000013049	RING-CH-type domain-containing protein.	Membrane associated ring-CH-type finger 6.	0.900
ENSAPLP00000028404	RNF139	ENSAPLP00000028404	ENSAPLP00000011206	RING-CH-type domain-containing protein.	Ring finger protein 139.	0.432
KXD1	ENSAPLP00000023897	ENSAPLP00000018673	ENSAPLP00000023897	KxDL motif containing 1.	Uncharacterized protein.	0.880
KXD1	RPS27A	ENSAPLP00000018673	ENSAPLP00000004982	KxDL motif containing 1.	Ubiquitin-like domain-containing protein.	0.945
MARCH6	ENSAPLP00000028404	ENSAPLP00000013049	ENSAPLP00000028404	Membrane associated ring-CH-type finger 6.	RING-CH-type domain-containing protein.	0.900
MARCH6	RNF139	ENSAPLP00000013049	ENSAPLP00000011206	Membrane associated ring-CH-type finger 6.	Ring finger protein 139.	0.432
MARCHF11	MARCHF7	ENSAPLP00000006580	ENSAPLP00000026323	Membrane associated ring-CH-type finger 11.	Membrane associated ring-CH-type finger 7.	0.476
MARCHF7	MARCHF11	ENSAPLP00000026323	ENSAPLP00000006580	Membrane associated ring-CH-type finger 7.	Membrane associated ring-CH-type finger 11.	0.476
RNF103	RPS27A	ENSAPLP00000017498	ENSAPLP00000004982	Ring finger protein 103.	Ubiquitin-like domain-containing protein.	0.511
RNF139	ENSAPLP00000023897	ENSAPLP00000011206	ENSAPLP00000023897	Ring finger protein 139.	Uncharacterized protein.	0.456
RNF139	ENSAPLP00000028404	ENSAPLP00000011206	ENSAPLP00000028404	Ring finger protein 139.	RING-CH-type domain-containing protein.	0.432
RNF139	MARCH6	ENSAPLP00000011206	ENSAPLP00000013049	Ring finger protein 139.	Membrane associated ring-CH-type finger 6.	0.432
RNF139	RPS27A	ENSAPLP00000011206	ENSAPLP00000004982	Ring finger protein 139.	Ubiquitin-like domain-containing protein.	0.561
RPS27A	ENSAPLP00000023897	ENSAPLP00000004982	ENSAPLP00000023897	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.997