14 items (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	U3J3X4_ANAPP	LRRCT domain-containing protein. (553 aa)
	TICAM1	TRIF-NTD domain-containing protein. (507 aa)
	TRAF3	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (567 aa)
	IRF7	Interferon regulatory factor 7. (523 aa)
	ENSAPLP00000023897	Uncharacterized protein. (208 aa)
	U3J954_ANAPP	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (660 aa)
	PTPN11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
	IKBKE	Inhibitor of nuclear factor kappa B kinase subunit epsilon. (725 aa)
	TLR4	Toll like receptor 4. (843 aa)
	TBK1	TANK binding kinase 1. (600 aa)
	TANK	TRAF family member associated NFKB activator. (481 aa)
	TRAF5	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (557 aa)
	LY96	Lymphocyte antigen 96. (155 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPLP00000023897	IKBKE	ENSAPLP00000023897	ENSAPLP00000014214	Uncharacterized protein.	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	0.529
ENSAPLP00000023897	LY96	ENSAPLP00000023897	ENSAPLP00000004372	Uncharacterized protein.	Lymphocyte antigen 96.	0.533
ENSAPLP00000023897	PTPN11	ENSAPLP00000023897	ENSAPLP00000015227	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.421
ENSAPLP00000023897	RPS27A	ENSAPLP00000023897	ENSAPLP00000004982	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.997
ENSAPLP00000023897	TANK	ENSAPLP00000023897	ENSAPLP00000007526	Uncharacterized protein.	TRAF family member associated NFKB activator.	0.491
ENSAPLP00000023897	TBK1	ENSAPLP00000023897	ENSAPLP00000008155	Uncharacterized protein.	TANK binding kinase 1.	0.529
ENSAPLP00000023897	TRAF3	ENSAPLP00000023897	ENSAPLP00000028635	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.661
ENSAPLP00000023897	TRAF5	ENSAPLP00000023897	ENSAPLP00000006206	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.577
ENSAPLP00000023897	U3J954_ANAPP	ENSAPLP00000023897	ENSAPLP00000016032	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.421
IKBKE	ENSAPLP00000023897	ENSAPLP00000014214	ENSAPLP00000023897	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	Uncharacterized protein.	0.529
IKBKE	IRF7	ENSAPLP00000014214	ENSAPLP00000026565	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	Interferon regulatory factor 7.	0.938
IKBKE	LY96	ENSAPLP00000014214	ENSAPLP00000004372	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	Lymphocyte antigen 96.	0.446
IKBKE	RPS27A	ENSAPLP00000014214	ENSAPLP00000004982	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	Ubiquitin-like domain-containing protein.	0.582
IKBKE	TANK	ENSAPLP00000014214	ENSAPLP00000007526	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	TRAF family member associated NFKB activator.	0.987
IKBKE	TBK1	ENSAPLP00000014214	ENSAPLP00000008155	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	TANK binding kinase 1.	0.922
IKBKE	TICAM1	ENSAPLP00000014214	ENSAPLP00000031025	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	TRIF-NTD domain-containing protein.	0.506
IKBKE	TLR4	ENSAPLP00000014214	ENSAPLP00000012401	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	Toll like receptor 4.	0.538
IKBKE	TRAF3	ENSAPLP00000014214	ENSAPLP00000028635	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.987
IKBKE	TRAF5	ENSAPLP00000014214	ENSAPLP00000006206	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.863
IRF7	IKBKE	ENSAPLP00000026565	ENSAPLP00000014214	Interferon regulatory factor 7.	Inhibitor of nuclear factor kappa B kinase subunit epsilon.	0.938