STRINGSTRING
HMGB1 HMGB1 TLR2 TLR2 TLR4 TLR4 STAT1 STAT1 IL10 IL10 PRKCE PRKCE IL6 IL6 LMNB1 LMNB1 MYD88 MYD88 SIRT1 SIRT1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HMGB1High mobility group box 1. (281 aa)
TLR2Toll like receptor 2; Belongs to the Toll-like receptor family. (713 aa)
TLR4Toll like receptor 4. (843 aa)
STAT1Signal transducer and activator of transcription. (869 aa)
IL10Interleukin 10. (177 aa)
PRKCEProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (743 aa)
IL6Uncharacterized protein. (350 aa)
LMNB1Lamin B1; Belongs to the intermediate filament family. (535 aa)
MYD88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (311 aa)
SIRT1Sirtuin 1. (777 aa)
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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