STRINGSTRING
TOB1 TOB1 WDR61 WDR61 PABPC1 PABPC1 BTG2 BTG2 DCPS DCPS CNOT6L CNOT6L TTC37 TTC37 DCP1B DCP1B XRN1 XRN1 EXOSC9 EXOSC9 EXOSC3 EXOSC3 EXOSC10 EXOSC10 PNLDC1 PNLDC1 CNOT8 CNOT8 DDX6 DDX6 EXOSC8 EXOSC8 LSM5 LSM5 BTG4 BTG4 CNOT10 CNOT10 EDC3 EDC3 EDC4 EDC4 HSPA9 HSPA9 PABPC4 PABPC4 MTREX MTREX ENO4 ENO4 ZCCHC7 ZCCHC7 CNOT7 CNOT7 EXOSC7 EXOSC7 EXOSC2 EXOSC2 LSM6 LSM6 DHX36 DHX36 DIS3 DIS3 CNOT6 CNOT6 DCP2 DCP2 LSM3 LSM3 DCP1A DCP1A TENT4B TENT4B DIS3L DIS3L CNOT4 CNOT4 CNOT9 CNOT9 HSPD1 HSPD1 BTG1 BTG1 LSM4 LSM4 PAN3 PAN3 ENO2 ENO2 ENO1 ENO1 EXOSC6 EXOSC6 LSM7 LSM7 TOB2 TOB2 PATL1 PATL1 MPHOSPH6 MPHOSPH6 CNOT1 CNOT1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TOB1Transducer of ERBB2, 1. (326 aa)
WDR61WD repeat domain 61. (305 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (637 aa)
BTG2BTG anti-proliferation factor 2. (163 aa)
DCPSDecapping enzyme, scavenger. (338 aa)
CNOT6LCCR4-NOT transcription complex subunit 6 like. (566 aa)
TTC37Tetratricopeptide repeat domain 37. (1562 aa)
DCP1BDecapping mRNA 1B. (605 aa)
XRN15'-3' exoribonuclease 1. (1152 aa)
EXOSC9Exosome component 9. (440 aa)
EXOSC3Exosome component 3. (269 aa)
EXOSC10Exosome component 10. (806 aa)
PNLDC1PARN like, ribonuclease domain containing 1. (534 aa)
CNOT8CCR4-NOT transcription complex subunit 8. (292 aa)
DDX6DEAD-box helicase 6; Belongs to the DEAD box helicase family. (483 aa)
EXOSC8Exosome component 8. (276 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
BTG4BTG anti-proliferation factor 4. (227 aa)
CNOT10CCR4-NOT transcription complex subunit 10. (744 aa)
EDC3Enhancer of mRNA decapping 3. (506 aa)
EDC4Enhancer of mRNA decapping 4. (1425 aa)
HSPA9Heat shock protein family A (Hsp70) member 9; Belongs to the heat shock protein 70 family. (612 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (632 aa)
MTREXMtr4 exosome RNA helicase. (1025 aa)
ENO4Enolase 4. (626 aa)
ZCCHC7Zinc finger CCHC-type containing 7. (577 aa)
CNOT7CCR4-NOT transcription complex subunit 7. (285 aa)
EXOSC7Exosome component 7. (291 aa)
EXOSC2Exosome component 2. (355 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (77 aa)
DHX36DEAH-box helicase 36. (989 aa)
DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (961 aa)
CNOT6CCR4-NOT transcription complex subunit 6. (557 aa)
DCP2Decapping mRNA 2. (435 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
DCP1ADecapping mRNA 1A. (588 aa)
TENT4BTerminal nucleotidyltransferase 4B. (317 aa)
DIS3LDIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family. (1034 aa)
CNOT4CCR4-NOT transcription complex subunit 4. (762 aa)
CNOT9CCR4-NOT transcription complex subunit 9. (299 aa)
HSPD1Heat shock protein family D (Hsp60) member 1; Belongs to the chaperonin (HSP60) family. (185 aa)
BTG1BTG anti-proliferation factor 1. (341 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (138 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (963 aa)
ENO2Enolase 2. (408 aa)
ENO1Enolase_N domain-containing protein. (172 aa)
EXOSC6Exosome component 6. (287 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (120 aa)
TOB2Transducer of ERBB2, 2. (338 aa)
PATL1Uncharacterized protein. (344 aa)
MPHOSPH6M-phase phosphoprotein 6. (140 aa)
CNOT1CCR4-NOT transcription complex subunit 1. (2376 aa)
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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