(14 nodes) Nuclear membrane protein complex, and Breakdown of the nuclear lamina network (Anser cygnoides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DRAM1	DNA damage-regulated autophagy modulator protein 1. (247 aa)
	CASP6	Caspase 6. (303 aa)
	SYNE1	Nesprin-1 isoform X1. (8763 aa)
	LMNB1	Lamin-B1 isoform X1. (585 aa)
	ENSACDP00005011446	Sperm-associated antigen 4 protein-like isoform X1. (646 aa)
	SUN2	Sad1 and UNC84 domain containing 2. (796 aa)
	ENSACDP00005012739	Lamin-L(III)-like isoform X1. (587 aa)
	SUN1	SUN domain-containing protein 1 isoform X1. (905 aa)
	LMNB2	Lamin-B2. (592 aa)
	SYNE3	Nesprin-3 isoform X1. (977 aa)
	CLMN	Calmin. (825 aa)
	SYNE2	LOW QUALITY PROTEIN: nesprin-2. (7017 aa)
	WDFY3	WD repeat and FYVE domain-containing protein 3 isoform X1. (3001 aa)
	LMNA	LOW QUALITY PROTEIN: lamin. (653 aa)

Your Current Organism:

Anser cygnoides

NCBI taxonomy Id: 8845
Other names: A. cygnoides, Chinese goose, Swan goose, white Chinese goose

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CASP6	ENSACDP00005012739	ENSACDP00005001407	ENSACDP00005012739	Caspase 6.	Lamin-L(III)-like isoform X1.	0.956
CASP6	LMNA	ENSACDP00005001407	ENSACDP00005026096	Caspase 6.	LOW QUALITY PROTEIN: lamin.	0.972
CASP6	LMNB1	ENSACDP00005001407	ENSACDP00005009428	Caspase 6.	Lamin-B1 isoform X1.	0.962
CASP6	LMNB2	ENSACDP00005001407	ENSACDP00005018221	Caspase 6.	Lamin-B2.	0.961
CASP6	WDFY3	ENSACDP00005001407	ENSACDP00005025815	Caspase 6.	WD repeat and FYVE domain-containing protein 3 isoform X1.	0.400
CLMN	ENSACDP00005011446	ENSACDP00005019264	ENSACDP00005011446	Calmin.	Sperm-associated antigen 4 protein-like isoform X1.	0.732
CLMN	SUN1	ENSACDP00005019264	ENSACDP00005013604	Calmin.	SUN domain-containing protein 1 isoform X1.	0.754
CLMN	SUN2	ENSACDP00005019264	ENSACDP00005011832	Calmin.	Sad1 and UNC84 domain containing 2.	0.754
CLMN	SYNE3	ENSACDP00005019264	ENSACDP00005019253	Calmin.	Nesprin-3 isoform X1.	0.668
DRAM1	ENSACDP00005012739	ENSACDP00005001074	ENSACDP00005012739	DNA damage-regulated autophagy modulator protein 1.	Lamin-L(III)-like isoform X1.	0.451
DRAM1	LMNA	ENSACDP00005001074	ENSACDP00005026096	DNA damage-regulated autophagy modulator protein 1.	LOW QUALITY PROTEIN: lamin.	0.451
DRAM1	WDFY3	ENSACDP00005001074	ENSACDP00005025815	DNA damage-regulated autophagy modulator protein 1.	WD repeat and FYVE domain-containing protein 3 isoform X1.	0.679
ENSACDP00005011446	CLMN	ENSACDP00005011446	ENSACDP00005019264	Sperm-associated antigen 4 protein-like isoform X1.	Calmin.	0.732
ENSACDP00005011446	LMNA	ENSACDP00005011446	ENSACDP00005026096	Sperm-associated antigen 4 protein-like isoform X1.	LOW QUALITY PROTEIN: lamin.	0.415
ENSACDP00005011446	LMNB1	ENSACDP00005011446	ENSACDP00005009428	Sperm-associated antigen 4 protein-like isoform X1.	Lamin-B1 isoform X1.	0.415
ENSACDP00005011446	LMNB2	ENSACDP00005011446	ENSACDP00005018221	Sperm-associated antigen 4 protein-like isoform X1.	Lamin-B2.	0.415
ENSACDP00005011446	SUN1	ENSACDP00005011446	ENSACDP00005013604	Sperm-associated antigen 4 protein-like isoform X1.	SUN domain-containing protein 1 isoform X1.	0.563
ENSACDP00005011446	SUN2	ENSACDP00005011446	ENSACDP00005011832	Sperm-associated antigen 4 protein-like isoform X1.	Sad1 and UNC84 domain containing 2.	0.563
ENSACDP00005011446	SYNE1	ENSACDP00005011446	ENSACDP00005004139	Sperm-associated antigen 4 protein-like isoform X1.	Nesprin-1 isoform X1.	0.746
ENSACDP00005011446	SYNE2	ENSACDP00005011446	ENSACDP00005025464	Sperm-associated antigen 4 protein-like isoform X1.	LOW QUALITY PROTEIN: nesprin-2.	0.746