(38 nodes) Cholesterol binding network (Anser cygnoides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ERLIN1	ER lipid raft associated 1. (367 aa)
	CETP	Cholesteryl ester transfer protein isoform X1. (537 aa)
	NFE2L1	Nuclear factor erythroid 2-related factor 1/3. (773 aa)
	PROM1	Prominin-1 isoform X1. (869 aa)
	CD81	CD81 antigen. (236 aa)
	OSBPL5	LOW QUALITY PROTEIN: oxysterol-binding protein-related protein 5. (786 aa)
	ANXA6	Annexin A6. (672 aa)
	STARD3	StAR related lipid transfer domain containing 3. (501 aa)
	VDAC2	Voltage-dependent anion-selective channel protein 2 isoform X1. (296 aa)
	ENSACDP00005016568	annotation not available (135 aa)
	GRAMD1B	GRAM domain-containing protein 1B isoform X1. (830 aa)
	OSBPL6	Oxysterol-binding protein-related protein 3/6/7. (971 aa)
	ENSACDP00005016002	annotation not available (118 aa)
	ENSACDP00005015004	annotation not available (137 aa)
	TSPO	Translocator protein. (166 aa)
	NPC1	Niemann-Pick C1 protein. (1285 aa)
	OSBPL1A	Oxysterol-binding protein-related protein 1 isoform X1. (780 aa)
	ENSACDP00005014026	annotation not available (239 aa)
	APOD	Apolipoprotein D. (204 aa)
	APOA1	Apolipoprotein A1. (270 aa)
	OSBPL2	Oxysterol-binding protein-related protein 1/2. (481 aa)
	STARD4	StAR-related lipid transfer protein 4. (207 aa)
	APOF	Apolipoprotein F. (288 aa)
	SCARB2	Scavenger receptor class B member 2. (326 aa)
	ENSACDP00005022550	Translocator protein-like. (164 aa)
	PODN	Podocan. (582 aa)
	STARD5	StAR-related lipid transfer protein 5 isoform X1. (191 aa)
	ENSACDP00005010716	annotation not available (262 aa)
	GRAMD1C	GRAM domain containing 1C. (566 aa)
	STARD3NL	MLN64 N-terminal domain homolog isoform X1. (234 aa)
	PROM2	Prominin 2. (783 aa)
	NPC1L1	NPC1 like intracellular cholesterol transporter 1. (1229 aa)
	NPC2	Epididymal secretory protein E1. (303 aa)
	OSBPL8	Oxysterol-binding protein-related protein 8 isoform X1. (902 aa)
	OSBPL3	Oxysterol-binding protein-related protein 3 isoform X1. (888 aa)
	ENSACDP00005006678	annotation not available (876 aa)
	STAR	Steroidogenic acute regulatory protein, mitochondrial. (283 aa)
	ERLIN2	ER lipid raft associated 2. (369 aa)

Your Current Organism:

Anser cygnoides

NCBI taxonomy Id: 8845
Other names: A. cygnoides, Chinese goose, Swan goose, white Chinese goose

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOA1	APOD	ENSACDP00005019725	ENSACDP00005019324	Apolipoprotein A1.	Apolipoprotein D.	0.622
APOA1	CETP	ENSACDP00005019725	ENSACDP00005004763	Apolipoprotein A1.	Cholesteryl ester transfer protein isoform X1.	0.886
APOA1	ENSACDP00005016002	ENSACDP00005019725	ENSACDP00005016002	Apolipoprotein A1.	annotation not available	0.947
APOA1	SCARB2	ENSACDP00005019725	ENSACDP00005022149	Apolipoprotein A1.	Scavenger receptor class B member 2.	0.647
APOD	APOA1	ENSACDP00005019324	ENSACDP00005019725	Apolipoprotein D.	Apolipoprotein A1.	0.622
APOD	APOF	ENSACDP00005019324	ENSACDP00005021689	Apolipoprotein D.	Apolipoprotein F.	0.410
APOD	ENSACDP00005016002	ENSACDP00005019324	ENSACDP00005016002	Apolipoprotein D.	annotation not available	0.631
APOF	APOD	ENSACDP00005021689	ENSACDP00005019324	Apolipoprotein F.	Apolipoprotein D.	0.410
APOF	CETP	ENSACDP00005021689	ENSACDP00005004763	Apolipoprotein F.	Cholesteryl ester transfer protein isoform X1.	0.777
APOF	ENSACDP00005016002	ENSACDP00005021689	ENSACDP00005016002	Apolipoprotein F.	annotation not available	0.443
CETP	APOA1	ENSACDP00005004763	ENSACDP00005019725	Cholesteryl ester transfer protein isoform X1.	Apolipoprotein A1.	0.886
CETP	APOF	ENSACDP00005004763	ENSACDP00005021689	Cholesteryl ester transfer protein isoform X1.	Apolipoprotein F.	0.777
CETP	ENSACDP00005016002	ENSACDP00005004763	ENSACDP00005016002	Cholesteryl ester transfer protein isoform X1.	annotation not available	0.832
ENSACDP00005014026	OSBPL1A	ENSACDP00005014026	ENSACDP00005014121	annotation not available	Oxysterol-binding protein-related protein 1 isoform X1.	0.403
ENSACDP00005015004	OSBPL5	ENSACDP00005015004	ENSACDP00005002054	annotation not available	LOW QUALITY PROTEIN: oxysterol-binding protein-related protein 5.	0.895
ENSACDP00005016002	APOA1	ENSACDP00005016002	ENSACDP00005019725	annotation not available	Apolipoprotein A1.	0.947
ENSACDP00005016002	APOD	ENSACDP00005016002	ENSACDP00005019324	annotation not available	Apolipoprotein D.	0.631
ENSACDP00005016002	APOF	ENSACDP00005016002	ENSACDP00005021689	annotation not available	Apolipoprotein F.	0.443
ENSACDP00005016002	CETP	ENSACDP00005016002	ENSACDP00005004763	annotation not available	Cholesteryl ester transfer protein isoform X1.	0.832
ENSACDP00005016568	GRAMD1B	ENSACDP00005016568	ENSACDP00005016546	annotation not available	GRAM domain-containing protein 1B isoform X1.	0.818