STRINGSTRING
MNAT1 MNAT1 GTF2H3 GTF2H3 LOC104871412 LOC104871412 ERCC3 ERCC3 GTF2B GTF2B GTF2H5 GTF2H5 GTF2F1 GTF2F1 ERCC2 ERCC2 GTF2F2 GTF2F2 GTF2E1 GTF2E1 GTF2H4 GTF2H4 GTF2H1 GTF2H1 CDK7 CDK7 GTF2A1 GTF2A1 GTF2E2 GTF2E2 CCNH CCNH GTF2A2 GTF2A2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MNAT1CDK-activating kinase assembly factor MAT1. (309 aa)
GTF2H3General transcription factor IIH subunit 3. (305 aa)
LOC104871412General transcription factor IIH subunit 2. (395 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (781 aa)
GTF2BTranscription initiation factor IIB. (317 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (512 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit. (760 aa)
GTF2F2Short-chain dehydrogenase/reductase family 42E member 1. (249 aa)
GTF2E1General transcription factor IIE subunit 1. (441 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (406 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
CDK7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
GTF2A1General transcription factor IIA subunit 1. (375 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (293 aa)
CCNHCyclin-H; Belongs to the cyclin family. (323 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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