STRINGSTRING
GCA GCA ENSFDAP00000002352 ENSFDAP00000002352 SRI SRI CAPNS1 CAPNS1 CAPN5 CAPN5 CAPN3 CAPN3 CAPN12 CAPN12 PDCD6 PDCD6 CAPN13 CAPN13 CAPN2 CAPN2 PEF1 PEF1 CAPN6 CAPN6 HEBP2 HEBP2 CAST CAST CAPN1 CAPN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCAGrancalcin. (217 aa)
ENSFDAP00000002352annotation not available (382 aa)
SRISorcin. (183 aa)
CAPNS1Calpain small subunit 1. (256 aa)
CAPN5Calpain-5; Belongs to the peptidase C2 family. (640 aa)
CAPN3Calpain-3; Belongs to the peptidase C2 family. (909 aa)
CAPN12Calpain 12. (657 aa)
PDCD6Programmed cell death 6. (189 aa)
CAPN13Calpain-13; Belongs to the peptidase C2 family. (645 aa)
CAPN2Calpain-2 catalytic subunit; Belongs to the peptidase C2 family. (597 aa)
PEF1Peflin. (269 aa)
CAPN6Calpain-6; Belongs to the peptidase C2 family. (647 aa)
HEBP2Heme-binding protein 2. (174 aa)
CASTCalpastatin. (824 aa)
CAPN1Calpain-1 catalytic subunit; Belongs to the peptidase C2 family. (714 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.