16 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C14orf39	Chromosome unknown C14orf39 homolog. (577 aa)
	ENSFDAP00000017776	annotation not available (72 aa)
	LOC104851526	Histone-lysine N-methyltransferase SETMAR. (299 aa)
	HELQ	Helicase POLQ-like. (987 aa)
	H920_07462	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (142 aa)
	RBBP8	RB binding protein 8, endonuclease. (901 aa)
	SMARCAD1	annotation not available (1025 aa)
	ENSFDAP00000006648	annotation not available (129 aa)
	RAD52	DNA repair protein RAD52 like protein. (294 aa)
	BLM	Bloom syndrome protein. (1348 aa)
	DNA2	DNA2-like helicase. (1059 aa)
	BRIP1	Fanconi anemia group J protein. (1161 aa)
	SPO11	Meiotic recombination protein SPO11. (396 aa)
	RNF138	E3 ubiquitin-protein ligase RNF138. (208 aa)
	UBE2V2	Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
	EXD2	Exonuclease 3'-5' domain-containing protein 2. (617 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BLM	BRIP1	ENSFDAP00000003119	ENSFDAP00000001602	Bloom syndrome protein.	Fanconi anemia group J protein.	0.852
BLM	DNA2	ENSFDAP00000003119	ENSFDAP00000002417	Bloom syndrome protein.	DNA2-like helicase.	0.968
BLM	ENSFDAP00000006648	ENSFDAP00000003119	ENSFDAP00000006648	Bloom syndrome protein.	annotation not available	0.439
BLM	ENSFDAP00000017776	ENSFDAP00000003119	ENSFDAP00000017776	Bloom syndrome protein.	annotation not available	0.439
BLM	EXD2	ENSFDAP00000003119	ENSFDAP00000018577	Bloom syndrome protein.	Exonuclease 3'-5' domain-containing protein 2.	0.655
BLM	H920_07462	ENSFDAP00000003119	ENSFDAP00000010112	Bloom syndrome protein.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.439
BLM	HELQ	ENSFDAP00000003119	ENSFDAP00000010391	Bloom syndrome protein.	Helicase POLQ-like.	0.474
BLM	RAD52	ENSFDAP00000003119	ENSFDAP00000005194	Bloom syndrome protein.	DNA repair protein RAD52 like protein.	0.978
BLM	RBBP8	ENSFDAP00000003119	ENSFDAP00000009663	Bloom syndrome protein.	RB binding protein 8, endonuclease.	0.876
BLM	SMARCAD1	ENSFDAP00000003119	ENSFDAP00000008868	Bloom syndrome protein.	annotation not available	0.618
BLM	SPO11	ENSFDAP00000003119	ENSFDAP00000000892	Bloom syndrome protein.	Meiotic recombination protein SPO11.	0.581
BLM	UBE2V2	ENSFDAP00000003119	ENSFDAP00000021896	Bloom syndrome protein.	Ubiquitin-conjugating enzyme E2 variant 2.	0.598
BRIP1	BLM	ENSFDAP00000001602	ENSFDAP00000003119	Fanconi anemia group J protein.	Bloom syndrome protein.	0.852
BRIP1	DNA2	ENSFDAP00000001602	ENSFDAP00000002417	Fanconi anemia group J protein.	DNA2-like helicase.	0.770
BRIP1	EXD2	ENSFDAP00000001602	ENSFDAP00000018577	Fanconi anemia group J protein.	Exonuclease 3'-5' domain-containing protein 2.	0.615
BRIP1	RAD52	ENSFDAP00000001602	ENSFDAP00000005194	Fanconi anemia group J protein.	DNA repair protein RAD52 like protein.	0.798
BRIP1	RBBP8	ENSFDAP00000001602	ENSFDAP00000009663	Fanconi anemia group J protein.	RB binding protein 8, endonuclease.	0.804
BRIP1	UBE2V2	ENSFDAP00000001602	ENSFDAP00000021896	Fanconi anemia group J protein.	Ubiquitin-conjugating enzyme E2 variant 2.	0.440
DNA2	BLM	ENSFDAP00000002417	ENSFDAP00000003119	DNA2-like helicase.	Bloom syndrome protein.	0.968
DNA2	BRIP1	ENSFDAP00000002417	ENSFDAP00000001602	DNA2-like helicase.	Fanconi anemia group J protein.	0.770