STRINGSTRING
H920_05735 H920_05735 FBLL1 FBLL1 JAZF1 JAZF1 RPAIN RPAIN RPP38 RPP38 TAF1C TAF1C CAMK4 CAMK4 H920_01277 H920_01277 NRIP1 NRIP1 EXOSC8 EXOSC8 OTP OTP RGS22 RGS22 CDK7 CDK7 TAF4B TAF4B RREB1 RREB1 AFF4 AFF4 SNAI1 SNAI1 NOLC1 NOLC1 PTPN13 PTPN13 DAB2 DAB2 ENSFDAP00000017776 ENSFDAP00000017776 Nop58 Nop58 DCLRE1A DCLRE1A POLR2F POLR2F ENSFDAP00000018658 ENSFDAP00000018658 IP6K2 IP6K2 SELENBP1 SELENBP1 SMUG1 SMUG1 DEAF1 DEAF1 CD2AP CD2AP TOP1 TOP1 ESRRA ESRRA RAI14 RAI14 HERC4 HERC4 POLR1C POLR1C MLLT1 MLLT1 AGER AGER RERG RERG H920_05445 H920_05445 STN1 STN1 RSAD2 RSAD2 HOXB5 HOXB5 WDR43 WDR43 NOP56 NOP56 Prmt7 Prmt7 URB1 URB1 Znrf2 Znrf2 POLR1B POLR1B LEO1 LEO1 FBL FBL AKNA AKNA ENSFDAP00000006648 ENSFDAP00000006648 TRAF4 TRAF4 KIT KIT NEDD1 NEDD1 DCAF1 DCAF1 NCL NCL CHCHD1 CHCHD1 ENSFDAP00000004872 ENSFDAP00000004872 SPATA2 SPATA2 MBD6 MBD6 ENSFDAP00000004001 ENSFDAP00000004001 UTP15 UTP15 Fblim1 Fblim1 PAFAH1B2 PAFAH1B2 ZNF174 ZNF174 SAP30L SAP30L MAP3K14 MAP3K14 LIPA LIPA STAG2 STAG2 SMARCA4 SMARCA4 CC2D1A CC2D1A NFIB NFIB Eif3l Eif3l MALT1 MALT1 TRIM27 TRIM27 UTP4 UTP4 NFKBIE NFKBIE ICK ICK NOP53 NOP53 TXNRD1 TXNRD1 Smarcb1 Smarcb1 ORC6 ORC6 NUAK1 NUAK1 Kdm4a Kdm4a USO1 USO1 SESN1 SESN1 TERF1 TERF1 POLR1E POLR1E ARHGAP32 ARHGAP32 MRI1 MRI1 NUFIP1 NUFIP1 SMAD7 SMAD7 SAMD4A SAMD4A H920_07462 H920_07462 LOC104869211 LOC104869211
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H920_05735SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (376 aa)
FBLL1rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (291 aa)
JAZF1JAZF zinc finger 1. (204 aa)
RPAINRPA-interacting protein. (213 aa)
RPP38Ribonuclease P protein subunit p38. (284 aa)
TAF1CTATA box-binding protein-associated factor, RNA polymerase I, subunit C. (837 aa)
CAMK4Calcium/calmodulin-dependent protein kinase type IV. (409 aa)
H920_01277Homeobox protein engrailed-like. (123 aa)
NRIP1Nuclear receptor-interacting protein 1. (1155 aa)
EXOSC8Exosome complex component RRP43. (330 aa)
OTPOrthopedia homeobox. (187 aa)
RGS22Regulator of G protein signaling 22. (1135 aa)
CDK7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
TAF4BTranscription initiation factor TFIID subunit 4B. (730 aa)
RREB1Ras-responsive element-binding protein 1. (1522 aa)
AFF4AF4/FMR2 family member 4. (1171 aa)
SNAI1Zinc finger protein SNAI1. (264 aa)
NOLC1Nucleolar and coiled-body phosphoprotein 1. (706 aa)
PTPN13Tyrosine-protein phosphatase non-receptor type 13. (2437 aa)
DAB2Disabled like protein 2. (769 aa)
ENSFDAP00000017776annotation not available (72 aa)
Nop58Nucleolar protein 58. (533 aa)
DCLRE1ADNA cross-link repair 1A protein. (1034 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
ENSFDAP00000018658annotation not available (169 aa)
IP6K2Kinase; Belongs to the inositol phosphokinase (IPK) family. (448 aa)
SELENBP1Selenium-binding protein 1. (471 aa)
SMUG1Single-strand selective monofunctional uracil DNA glycosylase. (272 aa)
DEAF1DEAF1 transcription factor. (479 aa)
CD2APCD2-associated protein. (636 aa)
TOP1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (757 aa)
ESRRASteroid hormone receptor ERR1. (422 aa)
RAI14Ankycorbin. (975 aa)
HERC4Putative E3 ubiquitin-protein ligase HERC4. (1057 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1. (346 aa)
MLLT1Protein ENL. (552 aa)
AGERAdvanced glycosylation end product-specific receptor. (418 aa)
RERGRas-related and estrogen-regulated growth inhibitor. (200 aa)
H920_05445C-C chemokine receptor type 2; Belongs to the G-protein coupled receptor 1 family. (499 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (375 aa)
RSAD2Radical S-adenosyl methionine domain-containing protein 2. (351 aa)
HOXB5Homeobox protein Hox-B5. (247 aa)
WDR43WD repeat-containing protein 43. (676 aa)
NOP56NOP56 ribonucleoprotein. (590 aa)
Prmt7Protein arginine N-methyltransferase 7; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (508 aa)
URB1Nucleolar pre-ribosomal-associated protein 1. (2384 aa)
Znrf2Zinc and ring finger 2. (90 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
LEO1RNA polymerase-associated protein LEO1. (634 aa)
FBLFibrillarin. (322 aa)
AKNAAT-hook-containing transcription factor. (1242 aa)
ENSFDAP00000006648annotation not available (129 aa)
TRAF4TNF receptor-associated factor. (465 aa)
KITMast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (955 aa)
NEDD1Protein NEDD1. (659 aa)
DCAF1Protein VPRBP. (1507 aa)
NCLNucleolin. (708 aa)
CHCHD1Coiled-coil-helix-coiled-coil-helix domain-containing protein 1. (118 aa)
ENSFDAP00000004872annotation not available (80 aa)
SPATA2Spermatogenesis-associated protein 2. (514 aa)
MBD6Methyl-CpG-binding domain protein 6. (1003 aa)
ENSFDAP00000004001annotation not available (427 aa)
UTP15U3 small nucleolar RNA-associated protein 15 like protein. (517 aa)
Fblim1Filamin-binding LIM protein 1. (298 aa)
PAFAH1B2Platelet-activating factor acetylhydrolase IB subunit beta. (229 aa)
ZNF174Zinc finger protein 174. (407 aa)
SAP30LHistone deacetylase complex subunit SAP30L. (116 aa)
MAP3K14Mitogen-activated protein kinase kinase kinase 14. (945 aa)
LIPALipase; Belongs to the AB hydrolase superfamily. Lipase family. (399 aa)
STAG2Cohesin subunit SA-2. (1268 aa)
SMARCA4Transcription activator BRG1. (1519 aa)
CC2D1ACoiled-coil and C2 domain-containing protein 1A. (948 aa)
NFIBNuclear factor 1 B-type. (561 aa)
Eif3lEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (564 aa)
MALT1Uncharacterized protein. (770 aa)
TRIM27Tripartite motif containing 27. (461 aa)
UTP4Cirhin. (686 aa)
NFKBIENF-kappa-B inhibitor epsilon. (305 aa)
ICKSerine/threonine-protein kinase ICK. (632 aa)
NOP53Glioma tumor suppressor candidate region gene 2 protein. (419 aa)
TXNRD1Thioredoxin reductase 1, cytoplasmic; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (630 aa)
Smarcb1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. (354 aa)
ORC6Origin recognition complex subunit 6. (252 aa)
NUAK1NUAK family SNF1-like kinase 1. (399 aa)
Kdm4aLysine-specific demethylase 4A. (1068 aa)
USO1General vesicular transport factor p115. (929 aa)
SESN1Sestrin-1. (480 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (410 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49. (418 aa)
ARHGAP32Rho GTPase-activating protein 32. (2085 aa)
MRI1Methylthioribose-1-phosphate isomerase 1. (259 aa)
NUFIP1Nuclear fragile X mental retardation-interacting protein 1. (504 aa)
SMAD7Mothers against decapentaplegic homolog. (229 aa)
SAMD4ASterile alpha motif domain containing 4A. (616 aa)
H920_07462Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (142 aa)
LOC104869211Protein arginine N-methyltransferase 7; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (182 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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