28 items (Fukomys damarensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HSD17B12	Estradiol 17-beta-dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (312 aa)
	LOXL3	Lysyl oxidase like protein 3. (753 aa)
	SDC4	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (202 aa)
	ITGA3	Integrin alpha-3; Belongs to the integrin alpha chain family. (1000 aa)
	FBLN1	Fibulin 1. (705 aa)
	CTSS	Golgi phosphoprotein 3-like; Belongs to the peptidase C1 family. (331 aa)
	THBS1	Thrombospondin-1. (1181 aa)
	CTSV	Cathepsin L1; Belongs to the peptidase C1 family. (334 aa)
	FSTL3	Follistatin-related protein 3. (226 aa)
	TNFAIP6	TNF alpha induced protein 6. (277 aa)
	ITGA4	Integrin alpha-4; Belongs to the integrin alpha chain family. (967 aa)
	PLEKHA2	Pleckstrin homology domain-containing family A member 2. (432 aa)
	THBS4	Thrombospondin-4. (901 aa)
	Igfbp3	Insulin-like growth factor-binding protein 3. (170 aa)
	COMP	Cartilage oligomeric matrix protein. (712 aa)
	MYOC	Myocilin. (489 aa)
	ITGAV	Integrin alpha-V; Belongs to the integrin alpha chain family. (996 aa)
	MMP13	Collagenase 3. (471 aa)
	MFAP2	Microfibrillar-associated protein 2. (182 aa)
	CCDC80	Coiled-coil domain-containing protein 80. (956 aa)
	ITGB1	Integrin beta; Belongs to the integrin beta chain family. (803 aa)
	MMP9	Matrix metalloproteinase-9. (709 aa)
	CTSK	Cathepsin K. (328 aa)
	EPHA1	Ephrin type-A receptor 1. (951 aa)
	Itgb3	Integrin beta; Belongs to the integrin beta chain family. (761 aa)
	IGFBP5	Insulin-like growth factor-binding protein 5. (271 aa)
	MMP2	Matrix metallopeptidase 2. (644 aa)
	IGFBP6	Insulin-like growth factor-binding protein 6. (237 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC80	LOXL3	ENSFDAP00000021991	ENSFDAP00000011893	Coiled-coil domain-containing protein 80.	Lysyl oxidase like protein 3.	0.422
COMP	ITGA3	ENSFDAP00000007971	ENSFDAP00000010359	Cartilage oligomeric matrix protein.	Integrin alpha-3; Belongs to the integrin alpha chain family.	0.835
COMP	ITGA4	ENSFDAP00000007971	ENSFDAP00000009816	Cartilage oligomeric matrix protein.	Integrin alpha-4; Belongs to the integrin alpha chain family.	0.836
COMP	ITGAV	ENSFDAP00000007971	ENSFDAP00000007274	Cartilage oligomeric matrix protein.	Integrin alpha-V; Belongs to the integrin alpha chain family.	0.834
COMP	ITGB1	ENSFDAP00000007971	ENSFDAP00000022103	Cartilage oligomeric matrix protein.	Integrin beta; Belongs to the integrin beta chain family.	0.849
COMP	Itgb3	ENSFDAP00000007971	ENSFDAP00000016006	Cartilage oligomeric matrix protein.	Integrin beta; Belongs to the integrin beta chain family.	0.862
COMP	MMP13	ENSFDAP00000007971	ENSFDAP00000001952	Cartilage oligomeric matrix protein.	Collagenase 3.	0.527
COMP	MMP9	ENSFDAP00000007971	ENSFDAP00000023219	Cartilage oligomeric matrix protein.	Matrix metalloproteinase-9.	0.463
COMP	THBS1	ENSFDAP00000007971	ENSFDAP00000014077	Cartilage oligomeric matrix protein.	Thrombospondin-1.	0.811
COMP	THBS4	ENSFDAP00000007971	ENSFDAP00000008322	Cartilage oligomeric matrix protein.	Thrombospondin-4.	0.491
CTSK	CTSV	ENSFDAP00000014085	ENSFDAP00000013698	Cathepsin K.	Cathepsin L1; Belongs to the peptidase C1 family.	0.858
CTSK	MMP13	ENSFDAP00000014085	ENSFDAP00000001952	Cathepsin K.	Collagenase 3.	0.720
CTSK	MMP2	ENSFDAP00000014085	ENSFDAP00000016420	Cathepsin K.	Matrix metallopeptidase 2.	0.508
CTSK	MMP9	ENSFDAP00000014085	ENSFDAP00000023219	Cathepsin K.	Matrix metalloproteinase-9.	0.655
CTSS	CTSV	ENSFDAP00000014452	ENSFDAP00000013698	Golgi phosphoprotein 3-like; Belongs to the peptidase C1 family.	Cathepsin L1; Belongs to the peptidase C1 family.	0.942
CTSS	MMP13	ENSFDAP00000014452	ENSFDAP00000001952	Golgi phosphoprotein 3-like; Belongs to the peptidase C1 family.	Collagenase 3.	0.649
CTSS	MMP2	ENSFDAP00000014452	ENSFDAP00000016420	Golgi phosphoprotein 3-like; Belongs to the peptidase C1 family.	Matrix metallopeptidase 2.	0.479
CTSS	MMP9	ENSFDAP00000014452	ENSFDAP00000023219	Golgi phosphoprotein 3-like; Belongs to the peptidase C1 family.	Matrix metalloproteinase-9.	0.614
CTSV	CTSK	ENSFDAP00000013698	ENSFDAP00000014085	Cathepsin L1; Belongs to the peptidase C1 family.	Cathepsin K.	0.858
CTSV	CTSS	ENSFDAP00000013698	ENSFDAP00000014452	Cathepsin L1; Belongs to the peptidase C1 family.	Golgi phosphoprotein 3-like; Belongs to the peptidase C1 family.	0.942