(12 nodes) Response to iron(II) ion network (Fukomys damarensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GPLD1	Phosphatidylinositol-glycan-specific phospholipase D. (838 aa)
	PAWR	PRKC apoptosis WT1 regulator protein. (231 aa)
	ENSFDAP00000017826	annotation not available (133 aa)
	H920_15869	Lactase-phlorizin hydrolase; Belongs to the glycosyl hydrolase 1 family. (238 aa)
	Atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (198 aa)
	MAP1LC3A	Microtubule associated protein 1 light chain 3 alpha. (89 aa)
	H920_15870	Lactase-phlorizin hydrolase; Belongs to the glycosyl hydrolase 1 family. (408 aa)
	ACO1	Cytoplasmic aconitate hydratase. (889 aa)
	ENSFDAP00000007466	annotation not available (44 aa)
	Becn1	Beclin-1. (448 aa)
	H920_15868	Lactase-phlorizin hydrolase; Belongs to the glycosyl hydrolase 1 family. (250 aa)
	H920_17227	Beclin-1. (445 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Atg5	Becn1	ENSFDAP00000013584	ENSFDAP00000003859	Autophagy protein 5; Involved in autophagic vesicle formation.	Beclin-1.	0.697
Atg5	ENSFDAP00000017826	ENSFDAP00000013584	ENSFDAP00000017826	Autophagy protein 5; Involved in autophagic vesicle formation.	annotation not available	0.895
Atg5	H920_17227	ENSFDAP00000013584	ENSFDAP00000001093	Autophagy protein 5; Involved in autophagic vesicle formation.	Beclin-1.	0.697
Atg5	MAP1LC3A	ENSFDAP00000013584	ENSFDAP00000010931	Autophagy protein 5; Involved in autophagic vesicle formation.	Microtubule associated protein 1 light chain 3 alpha.	0.808
Becn1	Atg5	ENSFDAP00000003859	ENSFDAP00000013584	Beclin-1.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.697
Becn1	ENSFDAP00000007466	ENSFDAP00000003859	ENSFDAP00000007466	Beclin-1.	annotation not available	0.697
Becn1	ENSFDAP00000017826	ENSFDAP00000003859	ENSFDAP00000017826	Beclin-1.	annotation not available	0.697
Becn1	MAP1LC3A	ENSFDAP00000003859	ENSFDAP00000010931	Beclin-1.	Microtubule associated protein 1 light chain 3 alpha.	0.752
ENSFDAP00000007466	Becn1	ENSFDAP00000007466	ENSFDAP00000003859	annotation not available	Beclin-1.	0.697
ENSFDAP00000007466	H920_17227	ENSFDAP00000007466	ENSFDAP00000001093	annotation not available	Beclin-1.	0.697
ENSFDAP00000007466	MAP1LC3A	ENSFDAP00000007466	ENSFDAP00000010931	annotation not available	Microtubule associated protein 1 light chain 3 alpha.	0.808
ENSFDAP00000017826	Atg5	ENSFDAP00000017826	ENSFDAP00000013584	annotation not available	Autophagy protein 5; Involved in autophagic vesicle formation.	0.895
ENSFDAP00000017826	Becn1	ENSFDAP00000017826	ENSFDAP00000003859	annotation not available	Beclin-1.	0.697
ENSFDAP00000017826	H920_17227	ENSFDAP00000017826	ENSFDAP00000001093	annotation not available	Beclin-1.	0.697
ENSFDAP00000017826	MAP1LC3A	ENSFDAP00000017826	ENSFDAP00000010931	annotation not available	Microtubule associated protein 1 light chain 3 alpha.	0.808
H920_17227	Atg5	ENSFDAP00000001093	ENSFDAP00000013584	Beclin-1.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.697
H920_17227	ENSFDAP00000007466	ENSFDAP00000001093	ENSFDAP00000007466	Beclin-1.	annotation not available	0.697
H920_17227	ENSFDAP00000017826	ENSFDAP00000001093	ENSFDAP00000017826	Beclin-1.	annotation not available	0.697
H920_17227	MAP1LC3A	ENSFDAP00000001093	ENSFDAP00000010931	Beclin-1.	Microtubule associated protein 1 light chain 3 alpha.	0.752
MAP1LC3A	Atg5	ENSFDAP00000010931	ENSFDAP00000013584	Microtubule associated protein 1 light chain 3 alpha.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.808