STRINGSTRING
LOC104870588 LOC104870588 UBL5 UBL5 ENSFDAP00000007168 ENSFDAP00000007168 Sumo2 Sumo2 ATG12 ATG12 Urm1 Urm1 ENSFDAP00000002920 ENSFDAP00000002920 H920_05086 H920_05086 Ubc Ubc Sumo3 Sumo3 UBA52 UBA52 SUMO4 SUMO4 ENSFDAP00000012053 ENSFDAP00000012053 H920_10388 H920_10388
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC104870588NEDD8. (78 aa)
UBL5Ubiquitin like 5. (73 aa)
ENSFDAP00000007168annotation not available (110 aa)
Sumo2Small ubiquitin-related modifier 3. (88 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (141 aa)
Urm1Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins such as MOCS3, ATPBD3, CTU2, USP15 and CAS. The thiocarboxylated form serves as substrate for co [...] (101 aa)
ENSFDAP00000002920annotation not available (87 aa)
H920_05086B-lymphocyte antigen CD19. (140 aa)
UbcPolyubiquitin-B. (235 aa)
Sumo3Small ubiquitin like modifier 3. (115 aa)
UBA52KxDL motif containing 1. (232 aa)
SUMO4Small ubiquitin-related modifier. (95 aa)
ENSFDAP00000012053annotation not available (81 aa)
H920_10388NEDD8. (81 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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