STRINGSTRING
F11R F11R ITGB1 ITGB1 JAM2 JAM2 Cx3cl1 Cx3cl1 Itgb2 Itgb2 Trem1 Trem1 ROCK1 ROCK1 EXT1 EXT1 TNF TNF LEP LEP TRIM55 TRIM55 ITGB7 ITGB7 Jaml Jaml SELP SELP SELL SELL PECAM1 PECAM1 ITGA1 ITGA1 Vcam1 Vcam1 ITGA4 ITGA4 SELE SELE CHST4 CHST4 GOLPH3 GOLPH3 CX3CR1 CX3CR1 CRKL CRKL H920_09873 H920_09873 ADD2 ADD2 GCNT1 GCNT1 H920_01147 H920_01147 PODXL2 PODXL2 ICAM1 ICAM1 H920_05445 H920_05445 LOC104867799 LOC104867799 CRK CRK LOC104851452 LOC104851452 ITGAL ITGAL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F11RJunctional adhesion molecule A. (299 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (803 aa)
JAM2Junctional adhesion molecule 2. (276 aa)
Cx3cl1Fractalkine. (348 aa)
Itgb2Integrin beta. (461 aa)
Trem1Triggering receptor expressed on myeloid cells 1. (255 aa)
ROCK1Rho-associated protein kinase 1; Belongs to the peptidase C19 family. (1368 aa)
EXT1Exostosin-1; Belongs to the glycosyltransferase 47 family. (746 aa)
TNFTumor necrosis factor; Belongs to the tumor necrosis factor family. (232 aa)
LEPLeptin. (167 aa)
TRIM55Tripartite motif-containing protein 55. (547 aa)
ITGB7Integrin beta; Belongs to the integrin beta chain family. (736 aa)
JamlSodium channel subunit beta-2. (333 aa)
SELPSelectin P. (768 aa)
SELLSelectin L. (372 aa)
PECAM1Platelet endothelial cell adhesion molecule. (740 aa)
ITGA1Integrin subunit alpha 1. (1175 aa)
Vcam1Vascular cell adhesion protein 1. (742 aa)
ITGA4Integrin alpha-4; Belongs to the integrin alpha chain family. (967 aa)
SELEE-selectin. (617 aa)
CHST4Sulfotransferase; Belongs to the sulfotransferase 1 family. (382 aa)
GOLPH3Golgi phosphoprotein 3. (246 aa)
CX3CR1CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. (356 aa)
CRKLCrk-like protein. (303 aa)
H920_09873Mucosal addressin cell adhesion molecule 1. (241 aa)
ADD2Beta-adducin. (724 aa)
GCNT1Glucosaminyl (N-acetyl) transferase 1. (428 aa)
H920_01147CD99 antigen-like protein 2. (170 aa)
PODXL2Podocalyxin like 2. (582 aa)
ICAM1Intercellular adhesion molecule 1. (500 aa)
H920_05445C-C chemokine receptor type 2; Belongs to the G-protein coupled receptor 1 family. (499 aa)
LOC104867799Tyrosine-protein kinase Fer. (265 aa)
CRKCRK proto-oncogene, adaptor protein. (247 aa)
LOC104851452Tyrosine-protein kinase Fer. (554 aa)
ITGALIntegrin alpha-L; Belongs to the integrin alpha chain family. (1138 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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