STRINGSTRING
EXT1 EXT1 TNF TNF ROCK1 ROCK1 JAM2 JAM2 LEP LEP ITGB7 ITGB7 SELP SELP ITGB1 ITGB1 SELL SELL Vcam1 Vcam1 ITGA4 ITGA4 CHST4 CHST4 GOLPH3 GOLPH3 CX3CR1 CX3CR1 H920_09873 H920_09873 ADD2 ADD2 GCNT1 GCNT1 PODXL2 PODXL2 SELE SELE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EXT1Exostosin-1; Belongs to the glycosyltransferase 47 family. (746 aa)
TNFTumor necrosis factor; Belongs to the tumor necrosis factor family. (232 aa)
ROCK1Rho-associated protein kinase 1; Belongs to the peptidase C19 family. (1368 aa)
JAM2Junctional adhesion molecule 2. (276 aa)
LEPLeptin. (167 aa)
ITGB7Integrin beta; Belongs to the integrin beta chain family. (736 aa)
SELPSelectin P. (768 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (803 aa)
SELLSelectin L. (372 aa)
Vcam1Vascular cell adhesion protein 1. (742 aa)
ITGA4Integrin alpha-4; Belongs to the integrin alpha chain family. (967 aa)
CHST4Sulfotransferase; Belongs to the sulfotransferase 1 family. (382 aa)
GOLPH3Golgi phosphoprotein 3. (246 aa)
CX3CR1CX3C chemokine receptor 1; Belongs to the G-protein coupled receptor 1 family. (356 aa)
H920_09873Mucosal addressin cell adhesion molecule 1. (241 aa)
ADD2Beta-adducin. (724 aa)
GCNT1Glucosaminyl (N-acetyl) transferase 1. (428 aa)
PODXL2Podocalyxin like 2. (582 aa)
SELEE-selectin. (617 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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