STRINGSTRING
H920_09344 H920_09344 MAD1L1 MAD1L1 GEN1 GEN1 NDC80 NDC80 XRCC3 XRCC3 H920_12625 H920_12625 DYNC1LI1 DYNC1LI1 PCID2 PCID2 Mad2l1 Mad2l1 Tpr Tpr
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H920_09344Nucleoprotein TPR. (420 aa)
MAD1L1Mitotic spindle assembly checkpoint protein MAD1. (717 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (869 aa)
NDC80Kinetochore protein NDC80 like protein. (642 aa)
XRCC3DNA repair protein XRCC3. (338 aa)
H920_12625Mitotic spindle assembly checkpoint protein MAD2A. (192 aa)
DYNC1LI1Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (496 aa)
PCID2PCI domain containing 2. (421 aa)
Mad2l1Mitotic spindle assembly checkpoint protein MAD2A. (205 aa)
TprNucleoprotein TPR. (2370 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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