28 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GABARAP	Gamma-aminobutyric acid receptor-associated protein. (117 aa)
	UBE2V2	Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
	BIRC2	Baculoviral IAP repeat-containing protein 2. (618 aa)
	UBE2D1	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (140 aa)
	SPSB4	SPRY domain-containing SOCS box protein 4. (170 aa)
	SASH1	SAM and SH3 domain-containing protein 1. (1233 aa)
	FBXO4	F-box protein 4. (360 aa)
	XIAP	Baculoviral IAP repeat-containing protein 4. (497 aa)
	ENSFDAP00000017776	annotation not available (72 aa)
	OTUB1	Ubiquitin thioesterase. (271 aa)
	UBR5	E3 ubiquitin-protein ligase UBR5. (2791 aa)
	MARCHF7	E3 ubiquitin-protein ligase MARCH7. (688 aa)
	PARP10	Poly [ADP-ribose] polymerase. (954 aa)
	TTC36	Tetratricopeptide repeat domain 36. (135 aa)
	BIRC3	Baculoviral IAP repeat-containing protein 3. (644 aa)
	NMI	N-myc and STAT interactor. (314 aa)
	TRIM44	Tripartite motif-containing protein 44. (342 aa)
	RNF40	E3 ubiquitin protein ligase; Belongs to the BRE1 family. (1001 aa)
	ENSFDAP00000006648	annotation not available (129 aa)
	GPS2	G protein pathway suppressor 2. (336 aa)
	SKP2	S-phase kinase-associated protein 2. (424 aa)
	OTUB2	Ubiquitin thioesterase OTUB2. (234 aa)
	DYSF	Dysferlin. (2120 aa)
	TRIP12	Putative E3 ubiquitin-protein ligase TRIP12. (2026 aa)
	PLAA	Phospholipase A-2-activating protein. (787 aa)
	H920_07462	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (142 aa)
	UBE2V1	Ubiquitin-conjugating enzyme E2 variant 1. (175 aa)
	NOD2	Nucleotide-binding oligomerization domain-containing protein 2. (1097 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BIRC2	BIRC3	ENSFDAP00000022636	ENSFDAP00000003956	Baculoviral IAP repeat-containing protein 2.	Baculoviral IAP repeat-containing protein 3.	0.962
BIRC2	ENSFDAP00000006648	ENSFDAP00000022636	ENSFDAP00000006648	Baculoviral IAP repeat-containing protein 2.	annotation not available	0.800
BIRC2	ENSFDAP00000017776	ENSFDAP00000022636	ENSFDAP00000017776	Baculoviral IAP repeat-containing protein 2.	annotation not available	0.800
BIRC2	H920_07462	ENSFDAP00000022636	ENSFDAP00000010112	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.800
BIRC2	NOD2	ENSFDAP00000022636	ENSFDAP00000015096	Baculoviral IAP repeat-containing protein 2.	Nucleotide-binding oligomerization domain-containing protein 2.	0.562
BIRC2	UBE2D1	ENSFDAP00000022636	ENSFDAP00000022664	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.	0.807
BIRC2	UBE2V1	ENSFDAP00000022636	ENSFDAP00000013309	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 variant 1.	0.750
BIRC2	UBE2V2	ENSFDAP00000022636	ENSFDAP00000021896	Baculoviral IAP repeat-containing protein 2.	Ubiquitin-conjugating enzyme E2 variant 2.	0.654
BIRC2	XIAP	ENSFDAP00000022636	ENSFDAP00000018109	Baculoviral IAP repeat-containing protein 2.	Baculoviral IAP repeat-containing protein 4.	0.928
BIRC3	BIRC2	ENSFDAP00000003956	ENSFDAP00000022636	Baculoviral IAP repeat-containing protein 3.	Baculoviral IAP repeat-containing protein 2.	0.962
BIRC3	ENSFDAP00000006648	ENSFDAP00000003956	ENSFDAP00000006648	Baculoviral IAP repeat-containing protein 3.	annotation not available	0.800
BIRC3	ENSFDAP00000017776	ENSFDAP00000003956	ENSFDAP00000017776	Baculoviral IAP repeat-containing protein 3.	annotation not available	0.800
BIRC3	H920_07462	ENSFDAP00000003956	ENSFDAP00000010112	Baculoviral IAP repeat-containing protein 3.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.800
BIRC3	NOD2	ENSFDAP00000003956	ENSFDAP00000015096	Baculoviral IAP repeat-containing protein 3.	Nucleotide-binding oligomerization domain-containing protein 2.	0.562
BIRC3	UBE2D1	ENSFDAP00000003956	ENSFDAP00000022664	Baculoviral IAP repeat-containing protein 3.	Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.	0.807
BIRC3	UBE2V1	ENSFDAP00000003956	ENSFDAP00000013309	Baculoviral IAP repeat-containing protein 3.	Ubiquitin-conjugating enzyme E2 variant 1.	0.750
BIRC3	UBE2V2	ENSFDAP00000003956	ENSFDAP00000021896	Baculoviral IAP repeat-containing protein 3.	Ubiquitin-conjugating enzyme E2 variant 2.	0.654
BIRC3	XIAP	ENSFDAP00000003956	ENSFDAP00000018109	Baculoviral IAP repeat-containing protein 3.	Baculoviral IAP repeat-containing protein 4.	0.932
ENSFDAP00000006648	BIRC2	ENSFDAP00000006648	ENSFDAP00000022636	annotation not available	Baculoviral IAP repeat-containing protein 2.	0.800
ENSFDAP00000006648	BIRC3	ENSFDAP00000006648	ENSFDAP00000003956	annotation not available	Baculoviral IAP repeat-containing protein 3.	0.800