STRINGSTRING
Itgb3 Itgb3 CPNE2 CPNE2 CPNE7 CPNE7 SEC24D SEC24D VARS1 VARS1 COL6A3 COL6A3 PARP4 PARP4 MATN4 MATN4 LOC104861190 LOC104861190 GTF2H3 GTF2H3 COL21A1 COL21A1 Itgb2 Itgb2 CPNE3 CPNE3 SEC23B SEC23B HEG1 HEG1 HMCN1 HMCN1 BDP1 BDP1 TDRD1 TDRD1 CACNA2D1 CACNA2D1 VWA5B1 VWA5B1 CACNA2D4 CACNA2D4 Col6a1 Col6a1 PSMD4 PSMD4 COCH COCH ITGB7 ITGB7 CPNE4 CPNE4 LOC104870945 LOC104870945 ITIH3 ITIH3 RO60 RO60 SEC24A SEC24A ITIH5 ITIH5 MATN1 MATN1 VIT VIT MED25 MED25 SVEP1 SVEP1 H920_12754 H920_12754 XRCC5 XRCC5 VWA8 VWA8 INTS6 INTS6 CPNE8 CPNE8 ITGAE ITGAE LOC104861192 LOC104861192 MATN3 MATN3 INTS6L INTS6L Col22a1 Col22a1 COL7A1 COL7A1 SEC23A SEC23A ITGB8 ITGB8 ITGA11 ITGA11 COL20A1 COL20A1 CACHD1 CACHD1 INTS14 INTS14 VWA5A VWA5A CACNA2D2 CACNA2D2 COL6A2 COL6A2 COL6A6 COL6A6 CARMIL3 CARMIL3 ITIH1 ITIH1 MDN1 MDN1 ANTXR2 ANTXR2 MATN2 MATN2 CLCA2 CLCA2 ITIH2 ITIH2 Sec24c Sec24c ITGA10 ITGA10 ITGB6 ITGB6 COL12A1 COL12A1 ITGB1 ITGB1 LOC104870942 LOC104870942 ITGA2 ITGA2 ITGAL ITGAL ITGB4 ITGB4 COL14A1 COL14A1 ITIH4 ITIH4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Itgb3Integrin beta; Belongs to the integrin beta chain family. (761 aa)
CPNE2Copine-2. (548 aa)
CPNE7Copine-7. (534 aa)
SEC24DProtein transport protein Sec24D. (1047 aa)
VARS1Valyl-tRNA synthetase. (1030 aa)
COL6A3Collagen alpha-3(VI) chain. (2515 aa)
PARP4Poly [ADP-ribose] polymerase. (1726 aa)
MATN4Matrilin-4. (624 aa)
LOC104861190Annexin. (327 aa)
GTF2H3General transcription factor IIH subunit 3. (305 aa)
COL21A1Collagen alpha-1(XXI) chain. (944 aa)
Itgb2Integrin beta. (461 aa)
CPNE3Copine-3. (533 aa)
SEC23BProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (766 aa)
HEG1Integrin beta; Belongs to the integrin beta chain family. (1141 aa)
HMCN1Hemicentin-1. (5462 aa)
BDP1Transcription factor TFIIIB component B'' like protein. (2392 aa)
TDRD1Tudor domain-containing protein 1. (1155 aa)
CACNA2D1Voltage-dependent calcium channel subunit alpha-2/delta-1. (1071 aa)
VWA5B1Von Willebrand factor A domain-containing protein 5B1. (1274 aa)
CACNA2D4Voltage-dependent calcium channel subunit alpha-2/delta-4. (1096 aa)
Col6a1Collagen alpha-1(VI) chain. (1027 aa)
PSMD426S proteasome non-ATPase regulatory subunit 4. (379 aa)
COCHCochlin. (550 aa)
ITGB7Integrin beta; Belongs to the integrin beta chain family. (736 aa)
CPNE4Copine-4. (556 aa)
LOC104870945Calcium-activated chloride channel regulator 4. (915 aa)
ITIH3Inter-alpha-trypsin inhibitor heavy chain H3. (884 aa)
RO6060 kDa SS-A/Ro ribonucleoprotein. (538 aa)
SEC24AProtein transport protein Sec24A. (1059 aa)
ITIH5Inter-alpha-trypsin inhibitor heavy chain H5. (742 aa)
MATN1Cartilage matrix protein. (496 aa)
VITVitrin. (648 aa)
MED25Mediator of RNA polymerase II transcription subunit 25. (745 aa)
SVEP1Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1. (3512 aa)
H920_12754Protein transport protein Sec24B. (706 aa)
XRCC5X-ray repair cross-complementing protein 5. (731 aa)
VWA8VWFA domain-containing protein. (1867 aa)
INTS6Integrator complex subunit 6. (887 aa)
CPNE8Copine-8. (557 aa)
ITGAEIntegrin alpha-E; Belongs to the integrin alpha chain family. (1165 aa)
LOC104861192Anthrax toxin receptor-like. (587 aa)
MATN3Matrilin-3. (411 aa)
INTS6LProtein DDX26B. (849 aa)
Col22a1Collagen alpha-1(XXII) chain. (1513 aa)
COL7A1Collagen alpha-1(VII) chain. (2697 aa)
SEC23AProtein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (765 aa)
ITGB8Integrin beta; Belongs to the integrin beta chain family. (768 aa)
ITGA11Integrin alpha-11; Belongs to the integrin alpha chain family. (1188 aa)
COL20A1Collagen alpha-1(XX) chain. (1293 aa)
CACHD1VWFA and cache domain-containing protein 1. (1211 aa)
INTS14VWFA domain-containing protein. (518 aa)
VWA5AVon Willebrand factor A domain-containing protein 5A. (805 aa)
CACNA2D2Voltage-dependent calcium channel subunit alpha-2/delta-2. (1082 aa)
COL6A2Collagen alpha-2(VI) chain. (1020 aa)
COL6A6Collagen alpha-6(VI) chain. (2247 aa)
CARMIL3Leucine-rich repeat-containing protein 16B. (1374 aa)
ITIH1Inter-alpha-trypsin inhibitor heavy chain H1. (903 aa)
MDN1Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5583 aa)
ANTXR2Anthrax toxin receptor; Belongs to the ATR family. (462 aa)
MATN2Matrilin-2. (920 aa)
CLCA2Calcium-activated chloride channel regulator 2. (936 aa)
ITIH2Inter-alpha-trypsin inhibitor heavy chain H2. (971 aa)
Sec24cProtein transport protein Sec24C. (1097 aa)
ITGA10Integrin alpha-10; Belongs to the integrin alpha chain family. (1166 aa)
ITGB6Integrin beta; Belongs to the integrin beta chain family. (807 aa)
COL12A1Collagen alpha-1(XII) chain. (3040 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (803 aa)
LOC104870942Epithelial chloride channel protein. (909 aa)
ITGA2Integrin alpha-2; Belongs to the integrin alpha chain family. (1179 aa)
ITGALIntegrin alpha-L; Belongs to the integrin alpha chain family. (1138 aa)
ITGB4Integrin beta. (1761 aa)
COL14A1Collagen alpha-1(XIV) chain. (1794 aa)
ITIH4Inter-alpha-trypsin inhibitor heavy chain H4. (876 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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