26 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

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co-expression

protein homology

Your Input:
	RFC4	Replication factor C subunit 4. (333 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	ATAD5	ATPase family AAA domain-containing protein 5. (1822 aa)
	RPA2	Replication protein A 32 kDa subunit. (270 aa)
	PCNA	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	Rchy1	RING finger and CHY zinc finger domain-containing protein 1. (254 aa)
	RFC1	Replication factor C subunit 1. (1141 aa)
	SPRTN	Uncharacterized protein. (496 aa)
	RCBTB1	RCC1 and BTB domain-containing protein 1. (531 aa)
	Vcp	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (800 aa)
	RFC2	Replication factor C subunit 2. (316 aa)
	RPA3	Replication protein A 14 kDa subunit. (122 aa)
	RFC3	Replication factor C subunit 3. (356 aa)
	H920_08841	Spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family. (598 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	POLH	DNA polymerase eta. (709 aa)
	RFC5	Replication factor C subunit 5. (338 aa)
	Ubc	Polyubiquitin-B. (235 aa)
	ENSFDAP00000018569	annotation not available (445 aa)
	RCBTB2	RCC1 and BTB domain-containing protein 2. (551 aa)
	UFD1	Ubiquitin fusion degradation protein 1 like protein. (311 aa)
	SPATA5	Spermatogenesis-associated protein 5. (882 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (615 aa)
	MEIOB	CDC24_OB3 domain-containing protein. (471 aa)
	NPLOC4	Fanconi anemia-associated protein of 100 kDa. (607 aa)
	UBA52	KxDL motif containing 1. (232 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATAD5	ENSFDAP00000018569	ENSFDAP00000006258	ENSFDAP00000018569	ATPase family AAA domain-containing protein 5.	annotation not available	0.571
ATAD5	H920_08841	ENSFDAP00000006258	ENSFDAP00000011722	ATPase family AAA domain-containing protein 5.	Spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family.	0.571
ATAD5	MEIOB	ENSFDAP00000006258	ENSFDAP00000021681	ATPase family AAA domain-containing protein 5.	CDC24_OB3 domain-containing protein.	0.843
ATAD5	PCNA	ENSFDAP00000006258	ENSFDAP00000000579	ATPase family AAA domain-containing protein 5.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.990
ATAD5	POLH	ENSFDAP00000006258	ENSFDAP00000015743	ATPase family AAA domain-containing protein 5.	DNA polymerase eta.	0.720
ATAD5	RFC1	ENSFDAP00000006258	ENSFDAP00000007472	ATPase family AAA domain-containing protein 5.	Replication factor C subunit 1.	0.687
ATAD5	RFC2	ENSFDAP00000006258	ENSFDAP00000011100	ATPase family AAA domain-containing protein 5.	Replication factor C subunit 2.	0.993
ATAD5	RFC3	ENSFDAP00000006258	ENSFDAP00000011384	ATPase family AAA domain-containing protein 5.	Replication factor C subunit 3.	0.995
ATAD5	RFC4	ENSFDAP00000006258	ENSFDAP00000016432	ATPase family AAA domain-containing protein 5.	Replication factor C subunit 4.	0.994
ATAD5	RFC5	ENSFDAP00000006258	ENSFDAP00000001452	ATPase family AAA domain-containing protein 5.	Replication factor C subunit 5.	0.994
ATAD5	RPA1	ENSFDAP00000006258	ENSFDAP00000021416	ATPase family AAA domain-containing protein 5.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.843
ATAD5	RPA2	ENSFDAP00000006258	ENSFDAP00000000020	ATPase family AAA domain-containing protein 5.	Replication protein A 32 kDa subunit.	0.700
ATAD5	RPA3	ENSFDAP00000006258	ENSFDAP00000011224	ATPase family AAA domain-containing protein 5.	Replication protein A 14 kDa subunit.	0.719
ATAD5	RPS27A	ENSFDAP00000006258	ENSFDAP00000014104	ATPase family AAA domain-containing protein 5.	Ubiquitin-40S ribosomal protein S27a.	0.676
ATAD5	SPATA5	ENSFDAP00000006258	ENSFDAP00000021309	ATPase family AAA domain-containing protein 5.	Spermatogenesis-associated protein 5.	0.571
ATAD5	SPRTN	ENSFDAP00000006258	ENSFDAP00000008016	ATPase family AAA domain-containing protein 5.	Uncharacterized protein.	0.796
ATAD5	UFD1	ENSFDAP00000006258	ENSFDAP00000020264	ATPase family AAA domain-containing protein 5.	Ubiquitin fusion degradation protein 1 like protein.	0.705
ATAD5	Ubc	ENSFDAP00000006258	ENSFDAP00000018389	ATPase family AAA domain-containing protein 5.	Polyubiquitin-B.	0.525
ATAD5	Vcp	ENSFDAP00000006258	ENSFDAP00000009072	ATPase family AAA domain-containing protein 5.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.571
ENSFDAP00000002920	ENSFDAP00000018569	ENSFDAP00000002920	ENSFDAP00000018569	annotation not available	annotation not available	0.807