43 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TNFAIP3	Tumor necrosis factor alpha-induced protein 3. (755 aa)
	ENSFDAP00000000117	annotation not available (223 aa)
	NKIRAS2	NFKB inhibitor interacting Ras like 2. (191 aa)
	Ikbke	Inhibitor of nuclear factor kappa-B kinase subunit epsilon. (130 aa)
	NLRX1	NLR family member X1. (972 aa)
	LOC104854401	Probable ATP-dependent RNA helicase DDX58. (520 aa)
	S100B	Protein S100-B; Belongs to the S-100 family. (92 aa)
	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta. (756 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	MAVS	Mitochondrial antiviral-signaling protein. (507 aa)
	HSP90AA1	Heat shock protein HSP 90-alpha. (733 aa)
	RNF135	Ring finger protein 135. (389 aa)
	TAX1BP1	Tax1-binding protein 1 like protein. (839 aa)
	CREBBP	CREB-binding protein. (2426 aa)
	EP300	Histone acetyltransferase p300. (2430 aa)
	RNF125	E3 ubiquitin-protein ligase RNF125. (138 aa)
	RELA	Transcription factor p65. (545 aa)
	HERC5	Putative E3 ubiquitin-protein ligase HERC6. (925 aa)
	HSP90AB1	Heat shock protein HSP 90-beta. (724 aa)
	DHX58	Putative ATP-dependent RNA helicase DHX58. (776 aa)
	APP	Amyloid beta A4 protein. (766 aa)
	RNF216	E3 ubiquitin-protein ligase RNF216. (917 aa)
	NKIRAS1	NF-kappa-B inhibitor-interacting Ras-like protein 1. (112 aa)
	TOMM70	Mitochondrial import receptor subunit TOM70. (599 aa)
	NFKBIA	NF-kappa-B inhibitor alpha. (224 aa)
	NFKB2	Nuclear factor kappa B subunit 2. (752 aa)
	IRF7	Interferon regulatory factor 7. (430 aa)
	Chuk	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (744 aa)
	IRF3	Interferon regulatory factor 3. (428 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit. (894 aa)
	TBK1	Serine/threonine-protein kinase TBK1. (729 aa)
	Hmgb1	High mobility group protein B1. (215 aa)
	ENSFDAP00000018123	annotation not available (101 aa)
	Ubc	Polyubiquitin-B. (235 aa)
	ENSFDAP00000018414	annotation not available (666 aa)
	H920_06373	High mobility group-T protein. (197 aa)
	NFKBIB	NF-kappa-B inhibitor beta. (358 aa)
	H920_16633	High mobility group protein B1. (166 aa)
	IKBKG	NF-kappa-B essential modulator. (417 aa)
	OTUD5	OTU domain-containing protein 5. (370 aa)
	AGER	Advanced glycosylation end product-specific receptor. (418 aa)
	H920_19873	Serum amyloid A-4 protein. (129 aa)
	SIKE1	Suppressor of IKBKE 1. (207 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGER	APP	ENSFDAP00000021332	ENSFDAP00000010719	Advanced glycosylation end product-specific receptor.	Amyloid beta A4 protein.	0.712
AGER	ENSFDAP00000000117	ENSFDAP00000021332	ENSFDAP00000000117	Advanced glycosylation end product-specific receptor.	annotation not available	0.739
AGER	ENSFDAP00000002920	ENSFDAP00000021332	ENSFDAP00000002920	Advanced glycosylation end product-specific receptor.	annotation not available	0.468
AGER	H920_06373	ENSFDAP00000021332	ENSFDAP00000019166	Advanced glycosylation end product-specific receptor.	High mobility group-T protein.	0.739
AGER	H920_16633	ENSFDAP00000021332	ENSFDAP00000019997	Advanced glycosylation end product-specific receptor.	High mobility group protein B1.	0.739
AGER	Hmgb1	ENSFDAP00000021332	ENSFDAP00000017939	Advanced glycosylation end product-specific receptor.	High mobility group protein B1.	0.739
AGER	NFKB1	ENSFDAP00000021332	ENSFDAP00000017893	Advanced glycosylation end product-specific receptor.	Nuclear factor NF-kappa-B p105 subunit.	0.554
AGER	NFKB2	ENSFDAP00000021332	ENSFDAP00000016259	Advanced glycosylation end product-specific receptor.	Nuclear factor kappa B subunit 2.	0.520
AGER	RELA	ENSFDAP00000021332	ENSFDAP00000006319	Advanced glycosylation end product-specific receptor.	Transcription factor p65.	0.528
AGER	S100B	ENSFDAP00000021332	ENSFDAP00000002478	Advanced glycosylation end product-specific receptor.	Protein S100-B; Belongs to the S-100 family.	0.989
AGER	Ubc	ENSFDAP00000021332	ENSFDAP00000018389	Advanced glycosylation end product-specific receptor.	Polyubiquitin-B.	0.464
APP	AGER	ENSFDAP00000010719	ENSFDAP00000021332	Amyloid beta A4 protein.	Advanced glycosylation end product-specific receptor.	0.712
APP	EP300	ENSFDAP00000010719	ENSFDAP00000005919	Amyloid beta A4 protein.	Histone acetyltransferase p300.	0.581
APP	NFKB1	ENSFDAP00000010719	ENSFDAP00000017893	Amyloid beta A4 protein.	Nuclear factor NF-kappa-B p105 subunit.	0.699
APP	NFKB2	ENSFDAP00000010719	ENSFDAP00000016259	Amyloid beta A4 protein.	Nuclear factor kappa B subunit 2.	0.604
APP	NFKBIA	ENSFDAP00000010719	ENSFDAP00000016040	Amyloid beta A4 protein.	NF-kappa-B inhibitor alpha.	0.425
APP	RELA	ENSFDAP00000010719	ENSFDAP00000006319	Amyloid beta A4 protein.	Transcription factor p65.	0.500
APP	S100B	ENSFDAP00000010719	ENSFDAP00000002478	Amyloid beta A4 protein.	Protein S100-B; Belongs to the S-100 family.	0.620
CREBBP	Chuk	ENSFDAP00000005253	ENSFDAP00000016676	CREB-binding protein.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.564
CREBBP	ENSFDAP00000002920	ENSFDAP00000005253	ENSFDAP00000002920	CREB-binding protein.	annotation not available	0.562