47 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NKIRAS2	NFKB inhibitor interacting Ras like 2. (191 aa)
	DHX30	Putative ATP-dependent RNA helicase DHX30. (1210 aa)
	UBA52	KxDL motif containing 1. (232 aa)
	TRIM21	E3 ubiquitin-protein ligase TRIM21. (467 aa)
	MRE11	MRE11 homolog, double strand break repair nuclease. (708 aa)
	IKBKG	NF-kappa-B essential modulator. (417 aa)
	STAT6	Signal transducer and activator of transcription. (839 aa)
	NLRP4	NACHT, LRR and PYD domains-containing protein 4. (984 aa)
	YTHDC2	YTH domain containing 2. (1397 aa)
	TRIM32	E3 ubiquitin-protein ligase TRIM32. (653 aa)
	NFKBIB	NF-kappa-B inhibitor beta. (358 aa)
	Ctnnb1	Catenin beta-1. (781 aa)
	Tlr3	Toll like receptor 3. (92 aa)
	DHX57	Putative ATP-dependent RNA helicase DHX57. (1283 aa)
	TREX1	Three prime repair exonuclease 1. (314 aa)
	ENSFDAP00000018414	annotation not available (666 aa)
	Ubc	Polyubiquitin-B. (235 aa)
	TBK1	Serine/threonine-protein kinase TBK1. (729 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit. (894 aa)
	IRF3	Interferon regulatory factor 3. (428 aa)
	DHX36	Putative ATP-dependent RNA helicase DHX36. (1006 aa)
	Chuk	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (744 aa)
	NLRC3	Protein NLRC3. (1109 aa)
	IRF7	Interferon regulatory factor 7. (430 aa)
	NFKB2	Nuclear factor kappa B subunit 2. (752 aa)
	NFKBIA	NF-kappa-B inhibitor alpha. (224 aa)
	NKIRAS1	NF-kappa-B inhibitor-interacting Ras-like protein 1. (112 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	H920_09656	Catenin beta-1. (83 aa)
	Dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1364 aa)
	YTHDC1	YTH domain-containing protein 1. (715 aa)
	DDX41	Putative ATP-dependent RNA helicase DDX41. (622 aa)
	ENSFDAP00000009445	annotation not available (321 aa)
	MYD88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (296 aa)
	Lrrfip1	LRR binding FLII interacting protein 1. (639 aa)
	ENSFDAP00000007008	annotation not available (309 aa)
	RELA	Transcription factor p65. (545 aa)
	EP300	Histone acetyltransferase p300. (2430 aa)
	Lrrfip2	LRR binding FLII interacting protein 2. (424 aa)
	TREX2	Three prime repair exonuclease 2. (236 aa)
	CREBBP	CREB-binding protein. (2426 aa)
	TRIM56	E3 ubiquitin-protein ligase TRIM56. (733 aa)
	MFSD1	Major facilitator superfamily domain-containing protein 1. (465 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta. (756 aa)
	STING1	Transmembrane protein 173. (378 aa)
	DHX9	ATP-dependent RNA helicase A. (1368 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREBBP	Chuk	ENSFDAP00000005253	ENSFDAP00000016676	CREB-binding protein.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.564
CREBBP	Ctnnb1	ENSFDAP00000005253	ENSFDAP00000019091	CREB-binding protein.	Catenin beta-1.	0.971
CREBBP	DHX9	ENSFDAP00000005253	ENSFDAP00000001449	CREB-binding protein.	ATP-dependent RNA helicase A.	0.627
CREBBP	ENSFDAP00000002920	ENSFDAP00000005253	ENSFDAP00000002920	CREB-binding protein.	annotation not available	0.562
CREBBP	ENSFDAP00000018414	ENSFDAP00000005253	ENSFDAP00000018414	CREB-binding protein.	annotation not available	0.564
CREBBP	EP300	ENSFDAP00000005253	ENSFDAP00000005919	CREB-binding protein.	Histone acetyltransferase p300.	0.996
CREBBP	H920_09656	ENSFDAP00000005253	ENSFDAP00000012987	CREB-binding protein.	Catenin beta-1.	0.971
CREBBP	IKBKB	ENSFDAP00000005253	ENSFDAP00000002634	CREB-binding protein.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.574
CREBBP	IKBKG	ENSFDAP00000005253	ENSFDAP00000020434	CREB-binding protein.	NF-kappa-B essential modulator.	0.521
CREBBP	IRF3	ENSFDAP00000005253	ENSFDAP00000017443	CREB-binding protein.	Interferon regulatory factor 3.	0.995
CREBBP	IRF7	ENSFDAP00000005253	ENSFDAP00000016433	CREB-binding protein.	Interferon regulatory factor 7.	0.929
CREBBP	MYD88	ENSFDAP00000005253	ENSFDAP00000008504	CREB-binding protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.802
CREBBP	NFKB1	ENSFDAP00000005253	ENSFDAP00000017893	CREB-binding protein.	Nuclear factor NF-kappa-B p105 subunit.	0.837
CREBBP	NFKB2	ENSFDAP00000005253	ENSFDAP00000016259	CREB-binding protein.	Nuclear factor kappa B subunit 2.	0.775
CREBBP	NFKBIA	ENSFDAP00000005253	ENSFDAP00000016040	CREB-binding protein.	NF-kappa-B inhibitor alpha.	0.673
CREBBP	NFKBIB	ENSFDAP00000005253	ENSFDAP00000019738	CREB-binding protein.	NF-kappa-B inhibitor beta.	0.418
CREBBP	RELA	ENSFDAP00000005253	ENSFDAP00000006319	CREB-binding protein.	Transcription factor p65.	0.989
CREBBP	RPS27A	ENSFDAP00000005253	ENSFDAP00000014104	CREB-binding protein.	Ubiquitin-40S ribosomal protein S27a.	0.692
CREBBP	STAT6	ENSFDAP00000005253	ENSFDAP00000020172	CREB-binding protein.	Signal transducer and activator of transcription.	0.936
CREBBP	UBA52	ENSFDAP00000005253	ENSFDAP00000022032	CREB-binding protein.	KxDL motif containing 1.	0.566