13 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UBA52	KxDL motif containing 1. (232 aa)
	IRAK1	Interleukin 1 receptor associated kinase 1. (453 aa)
	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta. (756 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	NGFR	Tumor necrosis factor receptor superfamily member 16. (362 aa)
	NGF	Beta-nerve growth factor; Belongs to the NGF-beta family. (305 aa)
	Gsap	Gamma-secretase-activating protein. (175 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (543 aa)
	NFKBIA	NF-kappa-B inhibitor alpha. (224 aa)
	SQSTM1	Sequestosome-1. (400 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit. (894 aa)
	Ubc	Polyubiquitin-B. (235 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFDAP00000002920	Gsap	ENSFDAP00000002920	ENSFDAP00000010572	annotation not available	Gamma-secretase-activating protein.	0.777
ENSFDAP00000002920	IKBKB	ENSFDAP00000002920	ENSFDAP00000002634	annotation not available	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.659
ENSFDAP00000002920	IRAK1	ENSFDAP00000002920	ENSFDAP00000001973	annotation not available	Interleukin 1 receptor associated kinase 1.	0.684
ENSFDAP00000002920	NFKB1	ENSFDAP00000002920	ENSFDAP00000017893	annotation not available	Nuclear factor NF-kappa-B p105 subunit.	0.669
ENSFDAP00000002920	NFKBIA	ENSFDAP00000002920	ENSFDAP00000016040	annotation not available	NF-kappa-B inhibitor alpha.	0.916
ENSFDAP00000002920	RPS27A	ENSFDAP00000002920	ENSFDAP00000014104	annotation not available	Ubiquitin-40S ribosomal protein S27a.	0.998
ENSFDAP00000002920	SQSTM1	ENSFDAP00000002920	ENSFDAP00000017565	annotation not available	Sequestosome-1.	0.777
ENSFDAP00000002920	TRAF6	ENSFDAP00000002920	ENSFDAP00000015339	annotation not available	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.963
ENSFDAP00000002920	UBA52	ENSFDAP00000002920	ENSFDAP00000022032	annotation not available	KxDL motif containing 1.	0.826
ENSFDAP00000002920	Ubc	ENSFDAP00000002920	ENSFDAP00000018389	annotation not available	Polyubiquitin-B.	0.987
Gsap	ENSFDAP00000002920	ENSFDAP00000010572	ENSFDAP00000002920	Gamma-secretase-activating protein.	annotation not available	0.777
Gsap	IKBKB	ENSFDAP00000010572	ENSFDAP00000002634	Gamma-secretase-activating protein.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.666
Gsap	IRAK1	ENSFDAP00000010572	ENSFDAP00000001973	Gamma-secretase-activating protein.	Interleukin 1 receptor associated kinase 1.	0.773
Gsap	NFKB1	ENSFDAP00000010572	ENSFDAP00000017893	Gamma-secretase-activating protein.	Nuclear factor NF-kappa-B p105 subunit.	0.492
Gsap	NFKBIA	ENSFDAP00000010572	ENSFDAP00000016040	Gamma-secretase-activating protein.	NF-kappa-B inhibitor alpha.	0.492
Gsap	NGFR	ENSFDAP00000010572	ENSFDAP00000005529	Gamma-secretase-activating protein.	Tumor necrosis factor receptor superfamily member 16.	0.702
Gsap	RPS27A	ENSFDAP00000010572	ENSFDAP00000014104	Gamma-secretase-activating protein.	Ubiquitin-40S ribosomal protein S27a.	0.885
Gsap	TRAF6	ENSFDAP00000010572	ENSFDAP00000015339	Gamma-secretase-activating protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.984
Gsap	UBA52	ENSFDAP00000010572	ENSFDAP00000022032	Gamma-secretase-activating protein.	KxDL motif containing 1.	0.777
Gsap	Ubc	ENSFDAP00000010572	ENSFDAP00000018389	Gamma-secretase-activating protein.	Polyubiquitin-B.	0.965