STRINGSTRING
H920_09873 H920_09873 Itgb3 Itgb3 COL18A1 COL18A1 ITGA11 ITGA11 CDH1 CDH1 BSG BSG VWA2 VWA2 FGG FGG JAM3 JAM3 LUM LUM SRL SRL ITGA5 ITGA5 ICAM1 ICAM1 FGB FGB COL3A1 COL3A1 ITGA8 ITGA8 LOC104876911 LOC104876911 Icam4 Icam4 ITGA10 ITGA10 ITGB6 ITGB6 ITGB1 ITGB1 COL5A1 COL5A1 ITGA2 ITGA2 ITGAL ITGAL FN1 FN1 COL13A1 COL13A1 VTN VTN CD44 CD44 Col9a1 Col9a1 COL7A1 COL7A1 THBS1 THBS1 ICAM2 ICAM2 COL8A2 COL8A2 COL5A2 COL5A2 H920_08687 H920_08687 ITGB8 ITGB8 COL1A1 COL1A1 COL6A3 COL6A3 FBN1 FBN1 COL2A1 COL2A1 FGA FGA ENSFDAP00000001943 ENSFDAP00000001943 JAM2 JAM2 COL8A1 COL8A1 MCMDC2 MCMDC2 Itgb2 Itgb2 SPP1 SPP1 ITGB5 ITGB5 ENSFDAP00000003664 ENSFDAP00000003664 ICAM5 ICAM5 HSPG2 HSPG2 F11R F11R COL4A1 COL4A1 Col6a1 Col6a1 ITGB7 ITGB7 H920_05193 H920_05193 ENSFDAP00000007221 ENSFDAP00000007221 ITGAV ITGAV COMP COMP IBSP IBSP PECAM1 PECAM1 ITGA1 ITGA1 Vcam1 Vcam1 CLN6 CLN6 COL16A1 COL16A1 COL4A6 COL4A6 COL4A5 COL4A5 ITGA4 ITGA4 ITGA3 ITGA3 LOC104872531 LOC104872531 Itga9 Itga9 H920_00038 H920_00038 ITGAE ITGAE COL1A2 COL1A2 TNC TNC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H920_09873Mucosal addressin cell adhesion molecule 1. (241 aa)
Itgb3Integrin beta; Belongs to the integrin beta chain family. (761 aa)
COL18A1Collagen alpha-1(XVIII) chain. (1646 aa)
ITGA11Integrin alpha-11; Belongs to the integrin alpha chain family. (1188 aa)
CDH1Cadherin-1; Cadherins are calcium-dependent cell adhesion proteins. (895 aa)
BSGBasigin. (364 aa)
VWA2Von Willebrand factor A domain containing 2. (769 aa)
FGGFibrinogen gamma chain. (445 aa)
JAM3Junctional adhesion molecule C. (310 aa)
LUMLumican. (337 aa)
SRLSarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (472 aa)
ITGA5Integrin alpha-5; Belongs to the integrin alpha chain family. (991 aa)
ICAM1Intercellular adhesion molecule 1. (500 aa)
FGBFibrinogen beta chain. (479 aa)
COL3A1Collagen alpha-1(III) chain. (1463 aa)
ITGA8Integrin alpha-8; Belongs to the integrin alpha chain family. (992 aa)
LOC104876911Integrin alpha-X. (144 aa)
Icam4Intercellular adhesion molecule 4 (Landsteiner-Wiener blood group). (224 aa)
ITGA10Integrin alpha-10; Belongs to the integrin alpha chain family. (1166 aa)
ITGB6Integrin beta; Belongs to the integrin beta chain family. (807 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (803 aa)
COL5A1Collagen type V alpha 1 chain. (1809 aa)
ITGA2Integrin alpha-2; Belongs to the integrin alpha chain family. (1179 aa)
ITGALIntegrin alpha-L; Belongs to the integrin alpha chain family. (1138 aa)
FN1Fibronectin. (2477 aa)
COL13A1Collagen alpha-1(XIII) chain. (631 aa)
VTNVitronectin. (431 aa)
CD44CD44 antigen. (695 aa)
Col9a1Collagen alpha-1(IX) chain. (910 aa)
COL7A1Collagen alpha-1(VII) chain. (2697 aa)
THBS1Thrombospondin-1. (1181 aa)
ICAM2Intercellular adhesion molecule 2. (278 aa)
COL8A2Collagen alpha-2(VIII) chain. (702 aa)
COL5A2Collagen alpha-2(V) chain. (1499 aa)
H920_08687Integrin alpha-9; Belongs to the integrin alpha chain family. (234 aa)
ITGB8Integrin beta; Belongs to the integrin beta chain family. (768 aa)
COL1A1Collagen alpha-1(I) chain. (1453 aa)
COL6A3Collagen alpha-3(VI) chain. (2515 aa)
FBN1Fibrillin-1. (2819 aa)
COL2A1Collagen alpha-1(II) chain. (1487 aa)
FGAFibrinogen alpha chain. (847 aa)
ENSFDAP00000001943annotation not available (152 aa)
JAM2Junctional adhesion molecule 2. (276 aa)
COL8A1Collagen alpha-1(VIII) chain. (824 aa)
MCMDC2Minichromosome maintenance domain containing 2. (681 aa)
Itgb2Integrin beta. (461 aa)
SPP1Osteopontin. (344 aa)
ITGB5Integrin subunit beta 5. (794 aa)
ENSFDAP00000003664annotation not available (75 aa)
ICAM5Intercellular adhesion molecule 5. (656 aa)
HSPG2Basement membrane-specific heparan sulfate proteoglycan core protein. (4246 aa)
F11RJunctional adhesion molecule A. (299 aa)
COL4A1Collagen alpha-1(IV) chain. (1490 aa)
Col6a1Collagen alpha-1(VI) chain. (1027 aa)
ITGB7Integrin beta; Belongs to the integrin beta chain family. (736 aa)
H920_05193Integrin alpha-M. (252 aa)
ENSFDAP00000007221annotation not available (58 aa)
ITGAVIntegrin alpha-V; Belongs to the integrin alpha chain family. (996 aa)
COMPCartilage oligomeric matrix protein. (712 aa)
IBSPBone sialoprotein 2. (323 aa)
PECAM1Platelet endothelial cell adhesion molecule. (740 aa)
ITGA1Integrin subunit alpha 1. (1175 aa)
Vcam1Vascular cell adhesion protein 1. (742 aa)
CLN6CLN6 transmembrane ER protein. (283 aa)
COL16A1Brain-specific angiogenesis inhibitor 2. (1280 aa)
COL4A6Collagen alpha-2(IV) chain. (1685 aa)
COL4A5Collagen alpha-5(IV) chain. (1691 aa)
ITGA4Integrin alpha-4; Belongs to the integrin alpha chain family. (967 aa)
ITGA3Integrin alpha-3; Belongs to the integrin alpha chain family. (1000 aa)
LOC104872531Integrin alpha-M; Belongs to the integrin alpha chain family. (359 aa)
Itga9Integrin alpha-9; Belongs to the integrin alpha chain family. (973 aa)
H920_00038Integrin alpha-X. (107 aa)
ITGAEIntegrin alpha-E; Belongs to the integrin alpha chain family. (1165 aa)
COL1A2Collagen alpha-2(I) chain. (1366 aa)
TNCTenascin. (2201 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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