STRINGSTRING
Trim59 Trim59 SPATA5 SPATA5 Amfr Amfr PSMC1 PSMC1 CALR CALR RNF103 RNF103 ENSFDAP00000018569 ENSFDAP00000018569 UGGT1 UGGT1 EDEM2 EDEM2 H920_08841 H920_08841 UBXN1 UBXN1 RAD23B RAD23B MOGS MOGS PDIA4 PDIA4 RNF139 RNF139 EDEM3 EDEM3 CLGN CLGN MARCHF9 MARCHF9 EDEM1 EDEM1 CALR3 CALR3 MARCHF6 MARCHF6 Ubc Ubc MARCHF10 MARCHF10 GANAB GANAB ENGASE ENGASE ENSFDAP00000014313 ENSFDAP00000014313 RPS27A RPS27A CANX CANX MARCHF7 MARCHF7 MAN1B1 MAN1B1 TRIM55 TRIM55 MARCHF2 MARCHF2 MARCHF3 MARCHF3 LOC104852640 LOC104852640 TRIM13 TRIM13 ENSFDAP00000002920 ENSFDAP00000002920 Marchf8 Marchf8 UGGT2 UGGT2 PDIA3 PDIA3 MARCHF1 MARCHF1 DERL1 DERL1 Vcp Vcp NGLY1 NGLY1 TRIM54 TRIM54 UBA52 UBA52
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Trim59Tripartite motif-containing protein 59. (396 aa)
SPATA5Spermatogenesis-associated protein 5. (882 aa)
AmfrAutocrine motility factor receptor. (98 aa)
PSMC126S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
CALRCalreticulin. (417 aa)
RNF103E3 ubiquitin-protein ligase RNF103. (683 aa)
ENSFDAP00000018569annotation not available (445 aa)
UGGT1UDP-glucose:glycoprotein glucosyltransferase 1. (1544 aa)
EDEM2ER degradation enhancing alpha-mannosidase like protein 2. (578 aa)
H920_08841Spermatogenesis-associated protein 5-like protein 1; Belongs to the AAA ATPase family. (598 aa)
UBXN1UBX domain-containing protein 1. (283 aa)
RAD23BUV excision repair protein RAD23 like protein B. (396 aa)
MOGSMannosyl-oligosaccharide glucosidase. (729 aa)
PDIA4Protein disulfide-isomerase. (612 aa)
RNF139E3 ubiquitin-protein ligase RNF139. (604 aa)
EDEM3ER degradation enhancing alpha-mannosidase like protein 3. (942 aa)
CLGNCalmegin. (607 aa)
MARCHF9E3 ubiquitin-protein ligase MARCH9. (286 aa)
EDEM1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (599 aa)
CALR3Calreticulin-3. (369 aa)
MARCHF6E3 ubiquitin-protein ligase MARCH6. (903 aa)
UbcPolyubiquitin-B. (235 aa)
MARCHF10Membrane associated ring-CH-type finger 10. (769 aa)
GANABNeutral alpha-glucosidase AB; Belongs to the glycosyl hydrolase 31 family. (952 aa)
ENGASECytosolic endo-beta-N-acetylglucosaminidase. (688 aa)
ENSFDAP00000014313annotation not available (236 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
CANXCalnexin. (592 aa)
MARCHF7E3 ubiquitin-protein ligase MARCH7. (688 aa)
MAN1B1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (663 aa)
TRIM55Tripartite motif-containing protein 55. (547 aa)
MARCHF2E3 ubiquitin-protein ligase MARCH2. (246 aa)
MARCHF3E3 ubiquitin-protein ligase MARCH3. (253 aa)
LOC104852640Calreticulin-like. (439 aa)
TRIM13E3 ubiquitin-protein ligase TRIM13. (407 aa)
ENSFDAP00000002920annotation not available (87 aa)
Marchf8E3 ubiquitin-protein ligase MARCH8. (289 aa)
UGGT2UDP-glucose:glycoprotein glucosyltransferase 2. (1458 aa)
PDIA3Protein disulfide-isomerase. (505 aa)
MARCHF1E3 ubiquitin-protein ligase MARCH1. (289 aa)
DERL1Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (251 aa)
VcpTransitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (800 aa)
NGLY1Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase. (609 aa)
TRIM54Tripartite motif-containing protein 54. (335 aa)
UBA52KxDL motif containing 1. (232 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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