62 items (Fukomys damarensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMA5	Proteasome 20S subunit alpha 5. (241 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1. (953 aa)
	CSNK1A1	Casein kinase I isoform alpha; Belongs to the protein kinase superfamily. (365 aa)
	BTRC	F-box/WD repeat-containing protein 1A. (589 aa)
	PSMD8	26S proteasome non-ATPase regulatory subunit 8. (350 aa)
	PSMC3	26S protease regulatory subunit 6A. (440 aa)
	PSMB6	Proteasome subunit beta. (239 aa)
	PSMD11	26S proteasome non-ATPase regulatory subunit 11. (391 aa)
	SUFU	SUFU negative regulator of hedgehog signaling. (465 aa)
	ENSFDAP00000002920	annotation not available (87 aa)
	PRKACA	Protein kinase cAMP-activated catalytic subunit alpha. (343 aa)
	PSMD7	26S proteasome non-ATPase regulatory subunit 7. (324 aa)
	PSMD13	26S proteasome non-ATPase regulatory subunit 13. (376 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10. (226 aa)
	PSMF1	Proteasome inhibitor PI31 subunit. (271 aa)
	PSMD4	26S proteasome non-ATPase regulatory subunit 4. (379 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (263 aa)
	PSME3	Proteasome activator complex subunit 3. (265 aa)
	PSMB3	Proteasome subunit beta. (205 aa)
	PSMD2	Proteasome 26S subunit, non-ATPase 2. (908 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSME4	Proteasome activator subunit 4. (1804 aa)
	PSMC6	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (389 aa)
	PSME2	Proteasome activator complex subunit 2. (239 aa)
	PSMD3	26S proteasome non-ATPase regulatory subunit 3. (331 aa)
	GLI3	Transcriptional activator GLI3. (1570 aa)
	PSMB7	Proteasome subunit beta type-7. (277 aa)
	GSK3B	Glycogen synthase kinase 3 beta. (442 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	PSMC5	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (406 aa)
	PSMA4	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (210 aa)
	H920_07431	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (136 aa)
	PSMD14	26S proteasome non-ATPase regulatory subunit 14. (310 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	PSMA6	Proteasome subunit alpha type. (247 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	PSMD5	26S proteasome non-ATPase regulatory subunit 5. (504 aa)
	H920_20354	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	PSMB1	Proteasome subunit beta. (240 aa)
	PSMB9	Proteasome subunit beta type-9. (219 aa)
	H920_15675	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (135 aa)
	H920_01229	Cullin-1; Belongs to the cullin family. (265 aa)
	Ubc	Polyubiquitin-B. (235 aa)
	Psmd9	26S proteasome non-ATPase regulatory subunit 9. (223 aa)
	ENSFDAP00000019490	annotation not available (283 aa)
	PSMD6	26S proteasome non-ATPase regulatory subunit 6. (340 aa)
	PSME1	Proteasome activator complex subunit 1. (249 aa)
	CUL1	Cullin-1; Belongs to the cullin family. (776 aa)
	ENSFDAP00000020130	annotation not available (290 aa)
	PSMC1	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
	PSMA1	Proteasome subunit alpha type-1. (264 aa)
	PSMA7	Proteasome endopeptidase complex. (216 aa)
	UBA52	KxDL motif containing 1. (232 aa)
	SKP1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (188 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	PSMD12	26S proteasome non-ATPase regulatory subunit 12. (456 aa)
	PSMC4	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (418 aa)
	PSMC2	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (464 aa)
	PRKACB	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily. (396 aa)
	RBX1	E3 ubiquitin-protein ligase RBX1. (108 aa)

Your Current Organism:

Fukomys damarensis

NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTRC	CSNK1A1	ENSFDAP00000000506	ENSFDAP00000000402	F-box/WD repeat-containing protein 1A.	Casein kinase I isoform alpha; Belongs to the protein kinase superfamily.	0.573
BTRC	CUL1	ENSFDAP00000000506	ENSFDAP00000020019	F-box/WD repeat-containing protein 1A.	Cullin-1; Belongs to the cullin family.	0.989
BTRC	ENSFDAP00000002920	ENSFDAP00000000506	ENSFDAP00000002920	F-box/WD repeat-containing protein 1A.	annotation not available	0.808
BTRC	ENSFDAP00000019490	ENSFDAP00000000506	ENSFDAP00000019490	F-box/WD repeat-containing protein 1A.	annotation not available	0.573
BTRC	ENSFDAP00000020130	ENSFDAP00000000506	ENSFDAP00000020130	F-box/WD repeat-containing protein 1A.	annotation not available	0.573
BTRC	GLI3	ENSFDAP00000000506	ENSFDAP00000011262	F-box/WD repeat-containing protein 1A.	Transcriptional activator GLI3.	0.940
BTRC	GSK3B	ENSFDAP00000000506	ENSFDAP00000012099	F-box/WD repeat-containing protein 1A.	Glycogen synthase kinase 3 beta.	0.986
BTRC	H920_01229	ENSFDAP00000000506	ENSFDAP00000018366	F-box/WD repeat-containing protein 1A.	Cullin-1; Belongs to the cullin family.	0.989
BTRC	H920_07431	ENSFDAP00000000506	ENSFDAP00000013050	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.968
BTRC	H920_15675	ENSFDAP00000000506	ENSFDAP00000018235	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.968
BTRC	H920_20354	ENSFDAP00000000506	ENSFDAP00000015382	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.968
BTRC	PSMC1	ENSFDAP00000000506	ENSFDAP00000020286	F-box/WD repeat-containing protein 1A.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.421
BTRC	PSMD14	ENSFDAP00000000506	ENSFDAP00000013708	F-box/WD repeat-containing protein 1A.	26S proteasome non-ATPase regulatory subunit 14.	0.534
BTRC	PSMD4	ENSFDAP00000000506	ENSFDAP00000005658	F-box/WD repeat-containing protein 1A.	26S proteasome non-ATPase regulatory subunit 4.	0.587
BTRC	PSMD7	ENSFDAP00000000506	ENSFDAP00000003749	F-box/WD repeat-containing protein 1A.	26S proteasome non-ATPase regulatory subunit 7.	0.509
BTRC	RBX1	ENSFDAP00000000506	ENSFDAP00000023324	F-box/WD repeat-containing protein 1A.	E3 ubiquitin-protein ligase RBX1.	0.995
BTRC	RPS27A	ENSFDAP00000000506	ENSFDAP00000014104	F-box/WD repeat-containing protein 1A.	Ubiquitin-40S ribosomal protein S27a.	0.867
BTRC	SKP1	ENSFDAP00000000506	ENSFDAP00000022283	F-box/WD repeat-containing protein 1A.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.968
BTRC	SUFU	ENSFDAP00000000506	ENSFDAP00000002479	F-box/WD repeat-containing protein 1A.	SUFU negative regulator of hedgehog signaling.	0.427
BTRC	UBA52	ENSFDAP00000000506	ENSFDAP00000022032	F-box/WD repeat-containing protein 1A.	KxDL motif containing 1.	0.843