STRINGSTRING
TFPT TFPT VWA5A VWA5A VWA5B2 VWA5B2 DDB2 DDB2 INO80 INO80 DDB1 DDB1 COPS2 COPS2 ACTR5 ACTR5 ACTR8 ACTR8 ZFP42 ZFP42 COPS8 COPS8 RUVBL1 RUVBL1 ENSFDAP00000002920 ENSFDAP00000002920 Yy1 Yy1 RPAP3 RPAP3 COPS6 COPS6 COPS7B COPS7B CUL4A CUL4A COPS7A COPS7A ENSFDAP00000006063 ENSFDAP00000006063 COPS5 COPS5 ENSFDAP00000004931 ENSFDAP00000004931 VWA5B1 VWA5B1 INO80D INO80D RPS27A RPS27A Ino80b Ino80b ACTL6A ACTL6A H920_08542 H920_08542 RAD23B RAD23B CUL4B CUL4B INO80C INO80C PARP2 PARP2 COPS3 COPS3 PARP1 PARP1 PARP3 PARP3 ENSFDAP00000009158 ENSFDAP00000009158 ENSFDAP00000008979 ENSFDAP00000008979 WBP1 WBP1 Cetn2 Cetn2 RBX1 RBX1 CETN3 CETN3 XPC XPC UBA52 UBA52 COPS4 COPS4 NFRKB NFRKB WDR76 WDR76 GPS1 GPS1 RAD23A RAD23A Mcrs1 Mcrs1 Ubc Ubc INO80E INO80E
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TFPTTCF3 fusion partner like protein. (252 aa)
VWA5AVon Willebrand factor A domain-containing protein 5A. (805 aa)
VWA5B2Von Willebrand factor A domain containing 5B2. (1019 aa)
DDB2DNA damage-binding protein 2. (296 aa)
INO80DNA helicase INO80. (1559 aa)
DDB1DNA damage-binding protein 1. (1140 aa)
COPS2COP9 signalosome complex subunit 2. (443 aa)
ACTR5Actin related protein 5. (602 aa)
ACTR8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (624 aa)
ZFP42Zinc finger protein 42 like protein. (272 aa)
COPS8COP9 signalosome complex subunit 8. (209 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
ENSFDAP00000002920annotation not available (87 aa)
Yy1YY1 transcription factor. (189 aa)
RPAP3RNA polymerase II-associated protein 3. (670 aa)
COPS6COP9 signalosome complex subunit 6. (347 aa)
COPS7BCOP9 signalosome complex subunit 7b. (264 aa)
CUL4ACullin 4A. (594 aa)
COPS7ACOP9 signalosome complex subunit 7a. (277 aa)
ENSFDAP00000006063annotation not available (179 aa)
COPS5COP9 signalosome complex subunit 5. (334 aa)
ENSFDAP00000004931annotation not available (394 aa)
VWA5B1Von Willebrand factor A domain-containing protein 5B1. (1274 aa)
INO80DINO80 complex subunit D. (1026 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (156 aa)
Ino80bINO80 complex subunit B. (349 aa)
ACTL6AActin-like protein 6A; Belongs to the actin family. (429 aa)
H920_08542Centrin-2. (157 aa)
RAD23BUV excision repair protein RAD23 like protein B. (396 aa)
CUL4BCullin-4B; Belongs to the cullin family. (888 aa)
INO80CINO80 complex subunit C. (192 aa)
PARP2Poly [ADP-ribose] polymerase. (558 aa)
COPS3COP9 signalosome complex subunit 3. (423 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (973 aa)
PARP3Poly [ADP-ribose] polymerase. (531 aa)
ENSFDAP00000009158annotation not available (49 aa)
ENSFDAP00000008979annotation not available (180 aa)
WBP1WW domain-binding protein 1. (304 aa)
Cetn2Centrin-2. (166 aa)
RBX1E3 ubiquitin-protein ligase RBX1. (108 aa)
CETN3Centrin-3. (231 aa)
XPCDNA repair protein complementing XP-C cells. (925 aa)
UBA52KxDL motif containing 1. (232 aa)
COPS4COP9 signalosome complex subunit 4. (406 aa)
NFRKBNuclear factor related to kappa-B-binding protein. (1299 aa)
WDR76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (614 aa)
GPS1COP9 signalosome complex subunit 1. (490 aa)
RAD23AUV excision repair protein RAD23 like protein A. (362 aa)
Mcrs1Microspherule protein 1. (462 aa)
UbcPolyubiquitin-B. (235 aa)
INO80EINO80 complex subunit E. (243 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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