Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQR | Isy1 | ENSFDAP00000013495 | ENSFDAP00000003129 | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | Pre-mRNA-splicing factor ISY1 like protein. | 0.998 |
| AQR | POLE3 | ENSFDAP00000013495 | ENSFDAP00000018285 | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | DNA polymerase epsilon subunit 3. | 0.513 |
| AQR | POLR2B | ENSFDAP00000013495 | ENSFDAP00000017526 | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.508 |
| AQR | PPIE | ENSFDAP00000013495 | ENSFDAP00000009303 | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. | 0.998 |
| AQR | PRPF19 | ENSFDAP00000013495 | ENSFDAP00000019024 | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | Pre-mRNA-processing factor 19. | 0.999 |
| AQR | XAB2 | ENSFDAP00000013495 | ENSFDAP00000004768 | RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. | XPA binding protein 2. | 0.999 |
| ATAD5 | CUL4A | ENSFDAP00000006258 | ENSFDAP00000006945 | ATPase family AAA domain-containing protein 5. | Cullin 4A. | 0.631 |
| ATAD5 | CUL4B | ENSFDAP00000006258 | ENSFDAP00000010967 | ATPase family AAA domain-containing protein 5. | Cullin-4B; Belongs to the cullin family. | 0.631 |
| ATAD5 | ENSFDAP00000015308 | ENSFDAP00000006258 | ENSFDAP00000015308 | ATPase family AAA domain-containing protein 5. | annotation not available | 0.797 |
| ATAD5 | ENSFDAP00000019135 | ENSFDAP00000006258 | ENSFDAP00000019135 | ATPase family AAA domain-containing protein 5. | annotation not available | 0.797 |
| ATAD5 | ERCC2 | ENSFDAP00000006258 | ENSFDAP00000009617 | ATPase family AAA domain-containing protein 5. | TFIIH basal transcription factor complex helicase XPD subunit. | 0.732 |
| ATAD5 | ERCC4 | ENSFDAP00000006258 | ENSFDAP00000003717 | ATPase family AAA domain-containing protein 5. | DNA repair endonuclease XPF. | 0.792 |
| ATAD5 | GTF2H1 | ENSFDAP00000006258 | ENSFDAP00000014315 | ATPase family AAA domain-containing protein 5. | General transcription factor IIH subunit 1. | 0.588 |
| ATAD5 | LIG1 | ENSFDAP00000006258 | ENSFDAP00000020814 | ATPase family AAA domain-containing protein 5. | DNA ligase. | 0.883 |
| ATAD5 | LIG3 | ENSFDAP00000006258 | ENSFDAP00000004129 | ATPase family AAA domain-containing protein 5. | DNA ligase. | 0.731 |
| ATAD5 | MEIOB | ENSFDAP00000006258 | ENSFDAP00000021681 | ATPase family AAA domain-containing protein 5. | CDC24_OB3 domain-containing protein. | 0.843 |
| ATAD5 | PCNA | ENSFDAP00000006258 | ENSFDAP00000000579 | ATPase family AAA domain-containing protein 5. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.990 |
| ATAD5 | POLD1 | ENSFDAP00000006258 | ENSFDAP00000019600 | ATPase family AAA domain-containing protein 5. | DNA polymerase delta 1, catalytic subunit. | 0.873 |
| ATAD5 | POLD2 | ENSFDAP00000006258 | ENSFDAP00000022279 | ATPase family AAA domain-containing protein 5. | DNA polymerase delta subunit 2. | 0.748 |
| ATAD5 | POLE | ENSFDAP00000006258 | ENSFDAP00000009411 | ATPase family AAA domain-containing protein 5. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.915 |
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