STRINGSTRING
Tns3 Tns3 LAMC3 LAMC3 RAC1 RAC1 GRB2 GRB2 LAMA4 LAMA4 COL11A2 COL11A2 COL2A1 COL2A1 RAP1A RAP1A MET MET COL1A2 COL1A2 COL24A1 COL24A1 Rap1b Rap1b COL1A1 COL1A1 CRKL CRKL TNS1 TNS1 COL5A2 COL5A2 LAMA3 LAMA3 ENSFDAP00000012096 ENSFDAP00000012096 FN1 FN1 LAMA5 LAMA5 ITGA2 ITGA2 COL5A1 COL5A1 ITGB1 ITGB1 LAMC2 LAMC2 FNDC3A FNDC3A COL3A1 COL3A1 LAMB3 LAMB3 MEGF11 MEGF11 CRK CRK HGF HGF RAPGEF1 RAPGEF1 PTK2 PTK2 LAMB2 LAMB2 TNS4 TNS4 LAMC1 LAMC1 COL27A1 COL27A1 ITGA3 ITGA3 FNDC3B FNDC3B LAMA1 LAMA1 LOC104858517 LOC104858517 DOCK7 DOCK7 GAB1 GAB1 COL11A1 COL11A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tns3Tensin-3. (359 aa)
LAMC3Laminin subunit gamma-3. (1248 aa)
RAC1Ras-related C3 botulinum toxin substrate 1. (199 aa)
GRB2Growth factor receptor-bound protein 2. (217 aa)
LAMA4Laminin subunit alpha-4. (1464 aa)
COL11A2Collagen alpha-2(XI) chain. (1668 aa)
COL2A1Collagen alpha-1(II) chain. (1487 aa)
RAP1ARas-related protein Rap-1A. (184 aa)
METHepatocyte growth factor receptor. (1382 aa)
COL1A2Collagen alpha-2(I) chain. (1366 aa)
COL24A1Collagen alpha-1(XXIV) chain. (1713 aa)
Rap1bRas-related protein Rap-1b. (184 aa)
COL1A1Collagen alpha-1(I) chain. (1453 aa)
CRKLCrk-like protein. (303 aa)
TNS1Tensin-1. (1804 aa)
COL5A2Collagen alpha-2(V) chain. (1499 aa)
LAMA3Laminin subunit alpha-3. (2791 aa)
ENSFDAP00000012096annotation not available (135 aa)
FN1Fibronectin. (2477 aa)
LAMA5Laminin subunit alpha-5. (3409 aa)
ITGA2Integrin alpha-2; Belongs to the integrin alpha chain family. (1179 aa)
COL5A1Collagen type V alpha 1 chain. (1809 aa)
ITGB1Integrin beta; Belongs to the integrin beta chain family. (803 aa)
LAMC2Laminin subunit gamma-2. (1187 aa)
FNDC3AFibronectin type-III domain-containing protein 3A. (1198 aa)
COL3A1Collagen alpha-1(III) chain. (1463 aa)
LAMB3Laminin subunit beta-3. (1169 aa)
MEGF11Multiple EGF like domains 11. (1097 aa)
CRKCRK proto-oncogene, adaptor protein. (247 aa)
HGFHepatocyte growth factor; Belongs to the peptidase S1 family. (725 aa)
RAPGEF1Rap guanine nucleotide exchange factor 1. (1211 aa)
PTK2Focal adhesion kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1083 aa)
LAMB2Laminin subunit beta-2. (1801 aa)
TNS4Tensin-4. (663 aa)
LAMC1Laminin subunit gamma-1. (1576 aa)
COL27A1Collagen type XXVII alpha 1 chain. (1609 aa)
ITGA3Integrin alpha-3; Belongs to the integrin alpha chain family. (1000 aa)
FNDC3BFibronectin type III domain-containing protein 3B. (1206 aa)
LAMA1Laminin subunit alpha-1. (2977 aa)
LOC104858517Laminin subunit alpha-2. (1355 aa)
DOCK7Dedicator of cytokinesis protein 8; Belongs to the DOCK family. (2118 aa)
GAB1GRB2-associated-binding protein 1. (698 aa)
COL11A1Collagen alpha-1(XI) chain. (1805 aa)
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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